Taxon lookup
From BugSigDB
Signatures containing the Ruminiclostridium genus (1508657) DIRECT
Legend: This taxon directlyDescendants of this taxonTaxa unmapped to the NCBI taxonomy
↑ Showing 10 direct signatures. For more results click here.
| Study | Signature | Differential Abundance | Taxa |
|---|---|---|---|
| Gut microbiota profiles in treatment-naïve children with attention deficit hyperactivity disorder | 111:001:002 | Decreased abundance in ADHD | Alcaligenaceae , Lachnoclostridium , Dialister , Faecalibacterium , Lachnospira eligens , Sutterella , Acidaminococcus , Ruminiclostridium , Tyzzerella |
| Dysbiosis of the Gut Microbiome in Lung Cancer | 138:001:002 | Decreased abundance in lung cancer | Dorea , Actinomycetes , Bifidobacterium , Bifidobacteriales , Bifidobacteriaceae , Coriobacteriaceae , Coriobacteriales , Collinsella , Clostridiaceae , Adlercreutzia , Lentibacillus , Alteromonas , Ruminiclostridium , Alteromonadaceae , Lachnospira , Alteromonadales , Peptoniphilus , Coprobacter , Pseudobutyrivibrio , Moryella , Sutterella , Peptostreptococcus |
| Variations in Oral Microbiota Composition Are Associated With a Risk of Throat Cancer | 150:001:001 | Increased abundance in Throat cancer | Pseudomonas , Aggregatibacter , Faecalibacterium , Ruminiclostridium , Lautropia , Phocaeicola , Bacteroides , Prevotellaceae , Azotobacter group , Bacteroidaceae , Burkholderiaceae , Burkholderiales , Alphaproteobacteria , Rickettsiales |
| Altered gut microbiota and microbial biomarkers associated with chronic kidney disease | 166:001:001 | Increased abundance in chronic kidney disease | Bacteroidia , Bacteroidales , Bacteroidota , Bacteroidaceae , Bacteroides , Gammaproteobacteria , Enterobacteriaceae , Enterobacterales , Escherichia , Shigella , Porphyromonadaceae , Parabacteroides , Mediterraneibacter gnavus CAG:126 , [Ruminococcus] torques CAG:61 , Weissella , Lactobacillaceae , Flavonifractor , Ruminiclostridium , Sellimonas , Thomasclavelia , Eggerthella , [Clostridium] innocuum |
| Gut microbiota dysbiosis is associated with Henoch-Schönlein Purpura in children | 196:001:002 | Decreased abundance in Henoch-Schönlein Purpura | Streptococcaceae , Streptococcus , Ruminiclostridium , Klebsiella , Lachnospira eligens , Ruminococcus , Haemophilus , Pasteurellaceae , Pasteurellales , Lachnospira , Parasutterella , Roseburia , Dialister , Alcaligenaceae , Burkholderiales , Betaproteobacteria , Christensenellaceae , Bacillota , Lachnospiraceae , Eubacteriales , Clostridia , Agathobacter rectalis |
| 16S rRNA gene sequencing reveals altered composition of gut microbiota in individuals with kidney stones | 245:001:002 | Decreased abundance in kidney stone group | Ruminiclostridium , Christensenellaceae , Dialister , Holdemania , Thalassospira , Rhodospirillaceae , Rhodospirillales , Alphaproteobacteria , Pyramidobacter , Pyramidobacter piscolens , Bifidobacterium adolescentis , Bifidobacterium , Bifidobacteriales , Bifidobacteriaceae , Actinomycetes , Roseburia inulinivorans , Roseburia , Alistipes shahii , Lachnospiraceae , Alistipes onderdonkii , Parasutterella , Phocaeicola plebeius , Enterobacter |
| 245:002:002 | Decreased abundance in kidney stone group | Anaerobutyricum hallii , Dorea , Ruminiclostridium , Anaerostipes , Fusicatenibacter , Subdoligranulum , Eubacterium ruminantium , Holdemanella , Dialister , Ruminococcus , Parasutterella , Bilophila | |
| Fecal Microbiota Taxonomic Shifts in Chinese Multiple Myeloma Patients Analyzed by Quantitative Polimerase Chain Reaction (QPCR) and 16S rRNA High-Throughput Sequencing | 276:002:002 | Decreased abundance in Multiple Myeloma patient | Ruminiclostridium , Anaerobutyricum hallii , Eubacterium , Coriobacteriia , Coriobacteriales , Coriobacteriaceae , Anaerostipes , Slackia , Catenibacterium , Rhodospirillaceae , Alphaproteobacteria , Rhodospirillales , Acidaminococcus |
| Changes in the stool and oropharyngeal microbiome in obsessive-compulsive disorder | 317:003:001 | Increased abundance in OCD T3 | Rikenellaceae , Alistipes , Ruminiclostridium , Anaerostipes , Barnesiellaceae , Oscillibacter , Flavonifractor , Eisenbergiella , Anaerotruncus , Bilophila , Coprobacter , Pygmaiobacter , Hungatella , Holdemania |
| Functional and phylogenetic alterations in gut microbiome are linked to graft-versus-host disease severity | 378:001:002 | Decreased abundance in Severe acute graft-versus-host-disease | Eubacteriales , Clostridia , Lachnospiraceae , Oscillospiraceae , Lachnoclostridium , Blautia , Sellimonas , Gemella , Flavonifractor , Oscillibacter , Alphaproteobacteria , Rhodospirillales , Thomasclavelia , Anaerostipes , Intestinimonas , Ruminiclostridium |
Signatures containing the Ruminiclostridium genus (1508657) INHERITED
Legend: This taxon directlyDescendants of this taxonTaxa unmapped to the NCBI taxonomy
↑ Showing 10 signatures by inheritance. For more results click here.
| Study | Signature | Differential Abundance | Taxa |
|---|---|---|---|
| Cervicovaginal microbiota dysbiosis correlates with HPV persistent infection | 435:001:001 | Increased abundance in HPV+ persistence | Pseudomonadota , Alphaproteobacteria , Actinomycetota , Clostridia , Eubacteriales , Hyphomicrobiales , Bacteroidota , Bacteroidia , Gammaproteobacteria , Rhizobiaceae , Phyllobacterium , Veillonellaceae , Bacteroidales , Prevotellaceae , Sphingomonadales , Sphingomonadaceae , Sphingomonas , Anaerococcus , Sphingomonas leidyi , Prevotella , Porphyromonadaceae , Porphyromonas , Phocaeicola coprocola DSM 17136 , Burkholderiaceae , Ruminiclostridium papyrosolvens , Dialister , Peptoniphilus |
| 16S rRNA gene sequencing of rectal swab in patients affected by COVID-19 | 489:001:002 | Decreased abundance in COVID-positive patients admitted to ICU (i-COVID-19) | Acetivibrio , Alistipes putredinis , Anaerobutyricum hallii , Anaerostipes hadrus , Anaerotruncus , Anaerotruncus colihominis , Atopobium deltae , Bacteroides clarus , Bacteroides eggerthii , Bacteroides fragilis , Bacteroides nordii , Bacteroides salyersiae , Bacteroides sp. , Bacteroides stercoris , Butyricicoccus sp. , Carnobacteriaceae , Christensenellaceae , Citrobacter , Eubacteriales Family XIII. Incertae Sedis , Clostridium sp. , Collinsella , Coprobacter , Coprobacter fastidiosus , Coriobacteriaceae , Desulfovibrio , Dorea longicatena , Eisenbergiella , Enterocloster bolteae , Enterocloster clostridioformis , Enterocloster lavalensis , Faecalibacterium , Faecalibacterium prausnitzii , Faecalibacterium sp. , Fenollaria , Fenollaria massiliensis , Flavonifractor , Flavonifractor plautii , Fusicatenibacter , Granulicatella , Halanaerobium , Leuconostoc , Mycoplasma , Mycoplasmataceae , Oribacterium , Oribacterium sp. , Oscillospira guilliermondii , Peptococcus , Phocaeicola massiliensis , Prevotella bivia , Pseudoflavonifractor , Pyramidobacter , Pyramidobacter piscolens , Robinsoniella , Salmonella , Subdoligranulum , Vibrio , Thomasclavelia spiroformis , unclassified Coriobacteriaceae , unclassified Oscillospiraceae , unclassified Coriobacteriia , Actinotignum , Metaprevotella , unclassified Rikenellaceae , Faecalicatena , Caproiciproducens , Peptoniphilus gorbachii , Prevotella sp. MC_18 , Prevotella sp. DJF_RP53 , Corynebacterium pyruviciproducens , Corynebacterium sp. NML96-0085 , Metaprevotella massiliensis , Peptoniphilus sp. S470 , Peptoniphilus sp. gpac007 , Prevotella sp. BI-42 , Anaerobium acetethylicum , Actinotignum schaalii , Saccharofermentans acetigenes , unclassified Hungatella , unclassified Collinsella , unclassified Butyricimonas , Clostridium sp. A9 , Anaerostipes sp. 992a , Clostridium sp. enrichment culture clone 7-14 , unclassified Desulfovibrio , Varibaculum cambriense , Fusicatenibacter saccharivorans , unclassified Ruminiclostridium , Clostridium sp. 14505 , Intestinimonas sp. FSAA-17 , unclassified Tyzzerella , Bacteroides finegoldii , unclassified Anaerostipes , Clostridium sp. BPY5 , Prevotella sp. oral taxon G70 , unclassified Caproiciproducens , unclassified Klebsiella |
| 489:002:002 | Decreased abundance in COVID-positive patients admitted to ICU (i-COVID-19) | Alcanivoracaceae , unclassified Coriobacteriia , unclassified Deltaproteobacteria , Carnobacteriaceae , Pectobacteriaceae , Moritellaceae , Selenomonadaceae , Micromonosporaceae , Coriobacteriaceae , Fenollaria , Metaprevotella , Alcanivorax , Sutterella , Aerococcus , Ileibacterium , Murdochiella , Coprobacillus , Kallipyga massiliensis , Faecalibacterium , Collinsella , Flavonifractor , unclassified Peptostreptococcaceae , Salmonella , unclassified Acidaminococcaceae , Vibrio , Lachnospira , Coriobacteriia , Olsenella , Subdoligranulum , Coprobacter , Eubacteriales Family XIII. Incertae Sedis , Granulicatella , Lactococcus , Citrobacter , Selenomonas , Desulfovibrio , unclassified Coriobacteriaceae , Cronobacter , Fenollaria massiliensis , Collinsella aerofaciens , Faecalibacterium sp. , unclassified Fenollaria , Prevotella disiens , Metaprevotella massiliensis , unclassified Phascolarctobacterium , Prevotella sp. DJF_RP53 , Lagierella massiliensis , Anaerostipes hadrus , Coprobacter fastidiosus , Eubacterium ramulus , Dialister micraerophilus , Phocaeicola massiliensis , Parabacteroides johnsonii , Lachnospira pectinoschiza , Alterileibacterium massiliense , [Eubacterium] siraeum , Hallella colorans , Anaerococcus degeneri , Campylobacter hominis , Enterocloster clostridioformis , Coprobacillus cateniformis , Roseburia faecis , Varibaculum anthropi , Bacteroides sp. DJF_B097 , [Lactobacillus] rogosae , Faecalibacterium prausnitzii , Prevotella bivia , Roseburia sp. , Klebsiella aerogenes , Salmonella enterica , Dorea longicatena , Anaerobutyricum hallii , Roseburia sp. 1120 , Hallella bergensis , Streptococcus thermophilus , unclassified Butyricimonas , unclassified Enterobacter , unclassified Collinsella , unclassified Escherichia , Prevotella sp. S8 F8 , Escherichia sp. C71 , Anaerostipes sp. 992a , unclassified Hungatella , Ruminococcus sp. Marseille-P328 , unclassified Ruminiclostridium , Clostridium sp. BPY5 , Alistipes sp. enrichment culture clone , Pantoea agglomerans , Shigella sonnei , Marseillibacter massiliensis , Coprococcus sp. , unclassified Desulfovibrio , Moritella abyssi , Clostridium sp. enrichment culture clone 7-14 , Granulicatella sp. , Blautia sp. Marseille-P2398 , unclassified Anaerostipes , Oscillibacter sp. Marseille-P3260 , Enterobacter cloacae | |
| Gut microbiota imbalance and its correlations with hormone and inflammatory factors in patients with stage 3/4 endometriosis | 518:001:002 | Decreased abundance in Stage 3/4 endometriosis patients | Parasutterella , Lachnospira , Odoribacter , Lachnospira eligens , Ruminococcus sp. , Lachnospiraceae bacterium NK4A136 , bacterium ND3007 , unclassified Defluviitaleaceae , uncultured Oscillospiraceae bacterium , unclassified Ruminiclostridium , mollicutes_RF9, uncultured Lachnospiraceae bacterium |
| Lower gut microbiome diversity and higher abundance of proinflammatory genus Collinsella are associated with biopsy-proven nonalcoholic steatohepatitis | 524:002:002 | Decreased abundance in Individuals diagnosed with Nonalcoholic steatohepatitis (NASH) with cirrhosis | Alistipes , Bacteroides , Barnesiella , Odoribacter , Parabacteroides , Peptoclostridium , unclassified Porphyromonadaceae , Terrisporobacter , Ruminiclostridium sp. , Odoribacteraceae |
| Microbiome recovery in adult females with uncomplicated urinary tract infections in a randomised phase 2A trial of the novel antibiotic gepotidacin (GSK2140944) | 557:002:001 | Increased abundance in Follow-up (visit around Day 28 ± 3 days). | Leptotrichia , Oscillospiraceae , Rothia , Neisseria , Campylobacter , Fusobacterium , Roseburia , Lawsonella , Blautia , Romboutsia , Selenomonas , Anaerostipes , Bifidobacterium , Eubacterium coprostanoligenes , Sutterella , Phascolarctobacterium , Veillonella , Actinomyces , Lachnospiraceae bacterium NK4A136 , unclassified Lachnospiraceae , uncultured Oscillospiraceae bacterium , Ruminiclostridium sp. , Prevotella sp. , unclassified Muribaculaceae , uncultured bacterium |
| 557:002:002 | Decreased abundance in Follow-up (visit around Day 28 ± 3 days). | Bacteroides , Collinsella , Fusicatenibacter , Gardnerella , Granulicatella , Lactobacillus , Oscillibacter , Parabacteroides , Rothia , Treponema , uncultured Oscillospiraceae bacterium , Rikenellaceae incertae sedis , Ruminococcus , unclassified Oscillospiraceae , Lachnospiraceae bacterium NK4A136 , Veillonella , Dialister , Prevotella sp. , Ruminiclostridium sp. , Actinomyces | |
| Characterization of gut microbiota in patients with primary hepatocellular carcinoma received immune checkpoint inhibitors: A Chinese population-based study | 667:001:001 | Increased abundance in Responders | Clostridia , Faecalibacterium , Faecalibacterium prausnitzii , Bacillota , Micrococcaceae , Mollicutes , Oscillospiraceae , Peptoniphilus , Phascolarctobacterium , Phascolarctobacterium faecium , Porphyromonas pasteri , Rothia , Ruminiclostridium hungatei , Ruminococcus , Ruminococcus bromii , Veillonellaceae , Eubacteriales |
| Gut microbiome modulates response to anti-PD-1 immunotherapy in melanoma patients | 688:002:001 | Increased abundance in Responders | Bacillota , Clostridia , Clostridiales bacterium , Oscillospiraceae , Faecalibacterium prausnitzii , Faecalibacterium , Ruminococcus bromii , Ruminococcus , Porphyromonas pasteri , Veillonellaceae , Ruminiclostridium hungatei , Phascolarctobacterium , Phascolarctobacterium faecium , Peptoniphilus , Micrococcaceae , Mollicutes , Rothia |
| Gegen Qinlian decoction enhances the effect of PD-1 blockade in colorectal cancer with microsatellite stability by remodelling the gut microbiota and the tumour microenvironment | 694:003:002 | Decreased abundance in low-dose GQD (300 mg/kg) + PD-1 | uncultured Bacteroidales bacterium , Anaerotruncus sp. , Candidatus Saccharimonas , uncultured Candidatus Saccharimonas sp. , Bifidobacterium animalis , Roseburia sp. , uncultured Ruminiclostridium sp. , unclassified Lachnospiraceae , uncultured Coprococcus sp. , uncultured Eubacteriales bacterium , Oscillospiraceae bacterium , Clostridiales bacterium |
