Taxon lookup
From BugSigDB
Signatures containing the Gemmiger genus (204475) DIRECT
Legend: This taxon directlyDescendants of this taxonTaxa unmapped to the NCBI taxonomy
↑ Showing 10 direct signatures. For more results click here.
| Study | Signature | Differential Abundance | Taxa |
|---|---|---|---|
| Bacterial Diversity of Intestinal Microbiota in Patients with Substance Use Disorders Revealed by 16S rRNA Gene Deep Sequencing | 052:001:002 | Decreased abundance in Substance use disorder patients | Bacteroidaceae , Rikenellaceae , Enterobacteriaceae , Erysipelotrichaceae , Desulfovibrionaceae , Bacilli , Erysipelotrichia , Deltaproteobacteria , Bilophila , Dorea , Parabacteroides , Streptococcus , Anaerostipes , Megasphaera , Fusicatenibacter , Alistipes , Gemmiger , Bacteroides , Erysipelotrichales , Lactobacillales , Ruminococcus , Streptococcaceae |
| 052:002:002 | Decreased abundance in Substance use disorder patients | Anaerostipes , Parabacteroides , Gemmiger , Bilophila , Streptococcus , Megasphaera , Fusicatenibacter | |
| New evidences on the altered gut microbiota in autism spectrum disorders | 067:004:001 | Decreased abundance in constipated neurotypical | Gemmiger |
| Weight gain in anorexia nervosa does not ameliorate the faecal microbiota, branched chain fatty acid profiles, and gastrointestinal complaints | 109:001:002 | Decreased abundance in anorexia patients before weight gain | Bacteroidota , Gemmiger , Roseburia |
| Gut microbial profile analysis by MiSeq sequencing of pancreatic carcinoma patients in China | 173:001:002 | Decreased abundance in pancreatic cancer | Anaerotruncus , Paraeggerthella , Proteus , Mogibacterium , Clostridium , Sporobacter , Eggerthella , Rhizobium , Brevundimonas , Akkermansia , Megasphaera , Dorea , Blautia , Flavonifractor , Butyricicoccus , Bilophila , Coprococcus , Anaerostipes , Megamonas , Bifidobacterium , Alistipes , Parasutterella , Gemmiger |
| Regulatory T Cells and Plasmacytoid Dendritic Cells Within the Tumor Microenvironment in Gastric Cancer Are Correlated With Gastric Microbiota Dysbiosis: A Preliminary Study | 178:003:001 | Increased abundance in gastric cancer tumor group | Peptostreptococcus , Bacillota , Bacilli , Lactobacillales , Streptococcaceae , Streptococcus , Veillonellaceae , Peptostreptococcaceae , Actinomycetota , Lactobacillaceae , Lactobacillus , Bifidobacteriaceae , Bifidobacterium , Bifidobacteriales , Burkholderiales , Neisseriales , Neisseriaceae , Neisseria , Enterobacteriaceae , Enterobacterales , Granulicatella , Carnobacteriaceae , Veillonella , Aquabacterium , Massilia , Oxalobacteraceae , Ruminococcus , Rubrobacter , Rubrobacteraceae , Rubrobacterales , Propionibacterium , Propionibacteriaceae , Shewanellaceae , Shewanella , Alteromonadales , Methylobacterium , Methylobacteriaceae , Dialister , Gemella , Roseburia , Oscillospiraceae , Blautia , Hydrogenophilus , Hydrogenophilales , Hydrogenophilaceae , Gemmiger , Coprococcus |
| Gut Microbiota Signatures in Gestational Anemia | 211:002:002 | Decreased abundance in gestational anemia (GA3 group) | Faecalibacterium , Ruminococcus , unclassified Mogibacterium , Oscillospiraceae , Eubacteriales , Anaerostipes , Gemmiger , Adlercreutzia |
| Altered Gut Microbiota Composition Associated with Eczema in Infants | 215:001:001 | Increased abundance in infants with eczema | Bacteroides clarus , Phocaeicola plebeius , Parabacteroides merdae , Segatella buccae , Mediterraneibacter gnavus , Faecalibacterium prausnitzii , Gemmiger formicilis , Akkermansia muciniphila , Desulfobacteraceae , Lachnospiraceae , Oscillospiraceae , Paenibacillaceae , Porphyromonadaceae , Rhizobiaceae , Verrucomicrobiaceae , Akkermansia , Anaerostipes , Archaea , Bilophila , Coprococcus , Cronobacter sakazakii , Desulfovibrio , Enterobacter , Faecalibacterium , Flavonifractor , Gemmiger , Paenibacillus , Parabacteroides , Paraprevotella , Phascolarctobacterium , Porphyromonas , Rhizobium , Roseburia , Veillonella , Lachnospiraceae incertae sedis , Escherichia , Shigella , Clostridium |
| A Walnut-Enriched Diet Affects Gut Microbiome in Healthy Caucasian Subjects: A Randomized, Controlled Trial | 236:002:001 | Decreased abundance in carbohydrate replacement (with walnuts) | Gemmiger , Fusicatenibacter , Bacteroides |
| 236:003:001 | Increased abundance in replace both | Gemmiger , Fusicatenibacter , Bacteroides |
Signatures containing the Gemmiger genus (204475) INHERITED
Legend: This taxon directlyDescendants of this taxonTaxa unmapped to the NCBI taxonomy
↑ Showing 10 signatures by inheritance. For more results click here.
| Study | Signature | Differential Abundance | Taxa |
|---|---|---|---|
| Body site-typical microbiome signatures for adults | 562:003:002 | abundance in feces from healthy adult | Faecalibacterium prausnitzii , Fusicatenibacter saccharivorans , Bacteroides uniformis , Agathobacter rectalis , Blautia wexlerae , Anaerostipes hadrus , Agathobaculum butyriciproducens , Dorea longicatena , Anaerobutyricum hallii , Dorea formicigenerans , Collinsella aerofaciens , Phocaeicola vulgatus , Blautia obeum , Roseburia inulinivorans , Parabacteroides distasonis , Gemmiger formicilis , Coprococcus comes , Ruthenibacterium lactatiformans , Roseburia hominis , Lachnospira eligens , [Ruminococcus] torques , Roseburia faecis , Bacteroides ovatus , Odoribacter splanchnicus , Alistipes putredinis , Coprococcus catus , Firmicutes bacterium CAG:83 , Streptococcus salivarius , Bifidobacterium longum , Bacteroides thetaiotaomicron , Alistipes finegoldii , Eubacterium ramulus , Oscillibacter sp. 57_20 , Alistipes shahii , Roseburia intestinalis , Flavonifractor plautii , Ruminococcus bromii , Parabacteroides merdae , Adlercreutzia equolifaciens , Oscillibacter sp. CAG:241 , Bacteroides caccae , Ruminococcus bicirculans (ex Wegman et al. 2014) , Barnesiella intestinihominis , Gordonibacter pamelaeae , Bifidobacterium adolescentis , Bacteroides xylanisolvens , environmental samples , Phocaeicola dorei , Eubacterium sp. CAG:38 , Escherichia coli , [Eubacterium] siraeum , Streptococcus parasanguinis , Bilophila wadsworthia , Lachnospira pectinoschiza , Eubacterium ventriosum , [Clostridium] leptum , Akkermansia muciniphila , Roseburia sp. CAG:471 , Parasutterella excrementihominis , Butyricimonas virosa , Collinsella intestinalis , Segatella copri , Firmicutes bacterium CAG:110 , Intestinibacter bartlettii , Canna indica |
| 562:009:002 | abundance in feces from healthy adult | Faecalibacterium prausnitzii , Fusicatenibacter saccharivorans , Bacteroides uniformis , Agathobacter rectalis , Blautia wexlerae , Anaerostipes hadrus , Agathobaculum butyriciproducens , Dorea longicatena , Anaerobutyricum hallii , Dorea formicigenerans , Collinsella aerofaciens , Phocaeicola vulgatus , Blautia obeum , Roseburia inulinivorans , Parabacteroides distasonis , Gemmiger formicilis , Coprococcus comes , Ruthenibacterium lactatiformans , Roseburia hominis , Lachnospira eligens , [Ruminococcus] torques , Roseburia faecis , Bacteroides ovatus , Odoribacter splanchnicus , Alistipes putredinis , Coprococcus catus , Firmicutes bacterium CAG:83 , Streptococcus salivarius , Bifidobacterium longum , Bacteroides thetaiotaomicron , Alistipes finegoldii , Eubacterium ramulus , Oscillibacter sp. 57_20 , Alistipes shahii , Roseburia intestinalis , Flavonifractor plautii | |
| Baseline gut microbiota predicts clinical response and colitis in metastatic melanoma patients treated with ipilimumab | 665:001:001 | Increased abundance in Responders, Colitis | Bacteroides ovatus , Blautia obeum , Clostridiales bacterium , Fusicatenibacter saccharivorans , Gemmiger formicilis , Lachnospiraceae , Oscillospiraceae , Roseburia inulinivorans |
| Metagenomic assessment of gut microbial communities and risk of severe COVID-19 | 784:001:002 | Decreased abundance in Severe COVID-19 | Firmicutes bacterium CAG:95 , Gemella sanguinis , Eubacterium ventriosum , Lactococcus lactis , Streptococcus oralis , Actinomyces oris , Streptococcus gordonii , Bifidobacterium pseudocatenulatum , Monoglobus pectinilyticus , Rothia mucilaginosa , Oscillibacter , Ruminococcus bicirculans (ex Wegman et al. 2014) , Roseburia faecis , Roseburia intestinalis , Collinsella stercoris , Roseburia inulinivorans , Coprococcus comes , Bifidobacterium adolescentis , Gemmiger formicilis , Eubacterium ramulus , Coprococcus catus , Ruminococcus bromii , Bifidobacterium longum , Agathobaculum butyriciproducens , [Eubacterium] siraeum , Adlercreutzia equolifaciens subsp. celatus , Adlercreutzia equolifaciens , Streptococcus thermophilus , [Clostridium] leptum , Lachnospira eligens , Dorea formicigenerans , [Ruminococcus] torques , Anaerostipes hadrus , Dorea longicatena , Roseburia hominis , Streptococcus salivarius , Streptococcus parasanguinis , Collinsella aerofaciens , Blautia wexlerae , Blautia obeum , Fusicatenibacter saccharivorans , Faecalibacterium prausnitzii , Schaalia odontolytica , Anaerobutyricum hallii , Agathobacter rectalis , Streptococcus mitis , Actinomyces sp. HPA0247 , Firmicutes bacterium CAG:94 |
| Microbiome diversity in African American, European American, and Egyptian colorectal cancer patients | 803:003:002 | Decreased abundance in European American Samples with Colorectal Cancer | Gemmiger formicilis , Geobacter , Mediterraneibacter gnavus , Segatella copri |
| Gut Microbiota Alterations and Their Functional Differences in Depression According to Enterotypes in Asian Individuals | 921:001:002 | Decreased abundance in Depressive group | Agathobacter rectalis , Agathobaculum butyriciproducens , Escherichia albertii , Eubacterium coprostanoligenes , Gemmiger formicilis , Parasutterella excrementihominis , Ruminococcus bromii , Ruminococcus callidus , [Clostridium] colinum , Faecalibacterium hattorii , Catonella massiliensis , Faecalibacillus intestinalis , Blautia intestinalis , Romboutsia maritimum |
| 921:002:002 | Decreased abundance in Depressive group | Agathobacter rectalis , Faecalibacterium hattorii , Gemmiger formicilis , Phocaeicola vulgatus , Roseburia hominis , Roseburia inulinivorans , Enterocloster hominis (ex Hitch et al. 2024) , Petroclostridium xylanilyticum , Dialister massiliensis , Escherichia albertii , Ruminococcus bromii , Segatella hominis , Eisenbergiella porci , Mediterraneibacter faecis , Bifidobacterium catenulatum , [Lactobacillus] rogosae , Lachnospira eligens , Streptococcus salivarius , Bacteroides uniformis , Blautia phocaeensis , Phascolarctobacterium faecium , Simiaoa hominis , Blautia hominis , Intestinimonas massiliensis (ex Afouda et al. 2020) , Faecalibacillus intestinalis , Dorea longicatena , Clostridium saudiense , Anaerostipes faecalis , Marseillibacter massiliensis , Haemophilus parainfluenzae , Bacteroides kribbi , Agathobaculum butyriciproducens , Eubacterium coprostanoligenes , Vescimonas coprocola , Pseudoflavonifractor gallinarum , Parasutterella excrementihominis , Phocaeicola massiliensis , Gehongia tenuis , Streptococcus periodonticum , Alistipes shahii , Blautia intestinalis , Romboutsia maritimum | |
| Immunoregulatory role of the gut microbiota in inflammatory depression | 943:005:002 | Decreased abundance in Inflammatory depression | Faecalibacterium prausnitzii , Gemmiger formicilis , Sarcina ventriculi , Subdoligranulum sp. 60_17 , Geosporobacter subterraneus , Clostridium sp. CAG:417 , Faecalibacterium sp. AF28-13AC , Blautia sp. AF22-5LB , Eubacterium sp. AF17-7 , Alistipes communis , Clostridium perfringens , Lachnospira eligens , Clostridium butyricum , Blautia sp. AF19-1 , Eubacterium sp. AF36-5BH , Romboutsia timonensis , Clostridium sp. CAG:343 , Blautia sp. CAG:37_48_57 , Faecalibacterium sp. AF10-46 , Blautia sp. AF14-40 , Blautia sp. OF03-13 , Blautia sp. AF32-4BH , Blautia sp. AF19-13LB , Faecalibacterium sp. AF27-11BH , Clostridium sp. CAG:413 , Ruminococcus sp. OM07-7 , Blautia sp. AF17-9LB , Faecalibacterium sp. OM04-11BH , Eubacterium sp. AF34-35BH , Oscillibacter sp. 57_20 , Roseburia sp. CAG:18 , Eubacterium sp. CAG:192 , Alistipes ihumii , Oscillibacter sp. CAG:241 , Clostridium sp. , Oscillibacter sp. , Fournierella massiliensis , Faecalibacterium sp. AM43-5AT , Butyricicoccus sp. AM42-5AC , Faecalibacterium sp. CAG:74_58_120 , Oscillibacter sp. CAG:241_62_21 , Fusicatenibacter saccharivorans , Blautia sp. CAG:37 |
| Oral and gut dysbiosis leads to functional alterations in Parkinson's disease | 957:005:002 | Decreased abundance in Patients with Parkinson's Disease (PD) | Segatella copri , Faecalibacterium FP929045, Faecalibacterium GL538271, Faecalibacterium prausnitzii , Prevotella VZCB, Roseburia faecis , Fusicatenibacter saccharivorans , Gemmiger formicilis , Ruminococcus callidus , Faecalibacterium GG617149 |
| Intestinal microbiota influences clinical outcome and side effects of early breast cancer treatment | 963:013:002 | Decreased abundance in Yes - increased BMI (Post-Chemo) | Ruminococcus bromii , Mitsuokella jalaludinii , Streptococcus oralis , Rothia mucilaginosa , Roseburia intestinalis , Streptococcus thermophilus , Clostridium perfringens , Ruminococcaceae bacterium D5 , Streptococcus mitis , Mitsuokella multacida , Actinomyces graevenitzii , Streptococcus vestibularis , Gemmiger formicilis , Gemella sanguinis , Leyella stercorea , Prevotella sp. CAG:5226 , Streptococcus salivarius , Bifidobacterium dentium , Veillonella infantium , Prevotella sp. CAG:520 , Veillonella parvula , Allisonella histaminiformans , Eisenbergiella tayi , Phocaeicola dorei , Veillonella atypica , Clostridium sp. CAG:253 , Bacteroides thetaiotaomicron , Roseburia hominis , Prevotella sp. CAG:1092 , Lachnospira eligens , Bacteroides salyersiae , Streptococcus parasanguinis , Hungatella hathewayi , Streptococcus infantis , Bacteroides fragilis , Agathobacter rectalis , Haemophilus parainfluenzae , Enterocloster aldenensis , Enterocloster clostridioformis |
