The intestinal microflora in allergic Estonian and Swedish 2-year-old children/Experiment 1
From BugSigDB
Reviewed Marked as Reviewed by Peace Sandy on 2024-2-29
Subjects
- Host species Species from which microbiome was sampled. Contact us to have more species added.
- Homo sapiens
- Body site Anatomical site where microbial samples were extracted from according to the Uber Anatomy Ontology
- Feces Cow dung,Cow pat,Droppings,Dung,Excrement,Excreta,Faeces,Fecal material,Fecal matter,Fewmet,Frass,Guano,Matières fécales@fr,Merde@fr,Ordure,Partie de la merde@fr,Piece of shit,Porción de mierda@es,Portion of dung,Portion of excrement,Portion of faeces,Portion of fecal material,Portion of fecal matter,Portion of feces,Portion of guano,Portion of scat,Portionem cacas,Scat,Spoor,Spraint,Stool,Teil der fäkalien@de,Feces,feces
- Condition The experimental condition / phenotype studied according to the Experimental Factor Ontology
- Food allergy Food Hypersensitivity,Food intolerance,Food allergy,food allergy
- Group 0 name Corresponds to the control (unexposed) group for case-control studies
- Nonallergic Estonian children.
- Group 1 name Corresponds to the case (exposed) group for case-control studies
- Allergic Estonian children.
- Group 1 definition Diagnostic criteria applied to define the specific condition / phenotype represented in the case (exposed) group
- 2-year-old children with confirmed diagnosis of allergy
- Group 0 sample size Number of subjects in the control (unexposed) group
- 16
- Group 1 sample size Number of subjects in the case (exposed) group
- 13
- Antibiotics exclusion Number of days without antibiotics usage (if applicable) and other antibiotics-related criteria used to exclude participants (if any)
- NIL
- 16S variable region One or more hypervariable region(s) of the bacterial 16S gene
- Not specified
Statistical Analysis
- Data transformation Data transformation applied to microbial abundance measurements prior to differential abundance testing (if any).
- relative abundances
- Statistical test
- T-Test
- Significance threshold p-value or FDR threshold used for differential abundance testing (if any)
- 0.05
- MHT correction Have statistical tests be corrected for multiple hypothesis testing (MHT)?
- No
Signature 1
Reviewed Marked as Reviewed by Peace Sandy on 2024-2-29
Source: Fig. 1
Description: Intestinal microflora of 13 allergic (grey) and 16 nonallergic (white) Estonian children. The results are presented as colonization rate (%, columns) and counts (log CFU/g, range and median, lines and filled symbols).
Abundance in Group 1: increased abundance in Allergic Estonian children.
| NCBI | Quality Control | Links |
|---|---|---|
| Staphylococcus aureus |
Revision editor(s): WikiWorks, Peace Sandy
Signature 2
Reviewed Marked as Reviewed by Peace Sandy on 2024-2-29
Source: Fig. 1.
Description: Intestinal microflora of 13 allergic (grey) and 16 nonallergic (white) Estonian children. The results are presented as colonization rate (%, columns) and counts (log CFU/g, range and median, lines and filled symbols).
Abundance in Group 1: decreased abundance in Allergic Estonian children.
| NCBI | Quality Control | Links |
|---|---|---|
| Bifidobacterium | ||
| Lactobacillus |
Revision editor(s): WikiWorks, Peace Sandy
