The Alterations of Vaginal Microbiome in HPV16 Infection as Identified by Shotgun Metagenomic Sequencing/Experiment 1/Signature 1

From BugSigDB
Reviewed Marked as Reviewed by Peace Sandy on 2024-1-25

Curated date: 2021/03/21

Curator: Cynthia Anderson

Revision editor(s): Cynthia Anderson, Peace Sandy

Source: Figure 3(B)

Description: Vaginal microbiome as HPV16-infection markers. (B) Histogram of the LDA scores computed for species differentially abundant between HPV16-positive women and controls. The LDA scores (log10) > 2 are listed

Abundance in Group 1: increased abundance in HPV-16+

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Anaerococcus tetradius
Atopobium deltae
Chlamydia trachomatis
Dialister invisus
Dialister micraerophilus
Fusobacterium nucleatum
Gardnerella vaginalis
Gemella asaccharolytica
Kytococcus sedentarius
Mageeibacillus indolicus
Mobiluncus curtisii
Nocardia brevicatena
Olsenella uli
Paracoccus denitrificans
Parvimonas micra
Pedobacter panaciterrae
Peptoniphilus harei
Peptoniphilus lacrimalis
Peptostreptococcus anaerobius
Prevotella amnii
Prevotella bivia
Prevotella corporis
Prevotella disiens
Prevotella melaninogenica
Schaalia turicensis
Solobacterium moorei
Streptomyces auratus
Stutzerimonas stutzeri
Veillonella montpellierensis
Methanobrevibacter oralis
Enterocytozoon bieneusi
Melampsora laricis-populina
Saccharomyces boulardii (nom. inval.)
Kalmanozyma brasiliensis
Malassezia restricta
Candida albicans
Saccharomyces mikatae
Pseudogymnoascus
Saccharomyces cerevisiae
Saccharomyces kudriavzevii
Enterobacteriaceae
Lactobacillus
Alphapapillomavirus 14

Revision editor(s): Cynthia Anderson, Peace Sandy