Multi-omics analysis reveals gut microbiota-ovary axis contributed to the follicular development difference between Meishan and Landrace × Yorkshire sows

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Reviewed Marked as Reviewed by KateRasheed on 2025-6-3
study design
Citation
PMID PubMed identifier for scientific articles.
DOI Digital object identifier for electronic documents.
URI Uniform resource identifier for web resources.
Authors
Xu B, Qin W, Chen Y, Tang Y, Zhou S, Huang J, Ma L, Yan X
Journal
Journal of animal science and biotechnology
Year
2023
Keywords:
Follicular development, Granulosa cells apoptosis, Gut microbiota, Short-chain fatty acids, Sows
BACKGROUND: The mechanism by which Meishan (MS) sows are superior to white crossbred sows in ovarian follicle development remains unclear. Given gut microbiota could regulate female ovarian function and reproductive capacity, this study aimed to determine the role of gut microbiota-ovary axis on follicular development in sows. METHODS: We compared the ovarian follicular development, gut microbiota, plasma metabolome, and follicular fluid metabolome between MS and Landrace × Yorkshire (L × Y) sows. A H2O2-induced cell apoptosis model was used to evaluate the effects of multi-omics identified metabolites on the apoptosis of porcine ovarian granulosa cells in vitro. RESULTS: Compared with L × Y sows, MS sows have greater ovary weight and improved follicular development, including the greater counts of large follicles of diameter ≥ 5 mm, secondary follicles, and antral follicles, but lesser atretic follicles. The ovarian granulosa cells in MS sows had alleviated apoptosis, which was indicated by the increased BCL-2, decreased caspases-3, and decreased cleaved caspases-3 than in L × Y sows. The ovarian follicular fluid of MS sows had higher concentrations of estradiol, progesterone, follicle-stimulating hormone, luteinizing hormone, and insulin like growth factor 1 than L × Y sows. Gut microbiota of MS sows formed a distinct cluster and had improved alpha diversity, including increased Shannon and decreased Simpson than those of L × Y sows. Corresponding to the enhanced function of carbohydrate metabolism and elevated short-chain fatty acids (SCFAs) in feces, the differential metabolites in plasma between MS and L × Y sows are also mainly enriched in pathways of fatty acid metabolism. There were significant correlations among SCFAs with follicular development, ovarian granulosa cells apoptosis, and follicular fluid hormones, respectively. Noteworthily, compared with L × Y sows, MS sows had higher follicular fluid SCFAs concentrations which could ameliorate H2O2-induced porcine granulosa cells apoptosis in vitro. CONCLUSION: MS sows have more secondary and antral follicles, but fewer atretic follicles and apoptotic ovarian granulosa cells, as well as harbored a distinctive gut microbiota than L × Y sows. Gut microbiota may participate in regulating ovarian follicular development via SCFAs affecting granulosa cells apoptosis in sows.

Experiment 1


Reviewed Marked as Reviewed by KateRasheed on 2025-6-3

Curated date: 2025/05/14

Curator: Ese

Revision editor(s): Ese, Anne-mariesharp

Subjects

Location of subjects
China
Host species Species from which microbiome was sampled. Contact us to have more species added.
Sus scrofa domesticus
Body site Anatomical site where microbial samples were extracted from according to the Uber Anatomy Ontology
Feces Cow dung,Cow pat,Droppings,Dung,Excrement,Excreta,Faeces,Fecal material,Fecal matter,Fewmet,Frass,Guano,Matières fécales@fr,Merde@fr,Ordure,Partie de la merde@fr,Piece of shit,Porción de mierda@es,Portion of dung,Portion of excrement,Portion of faeces,Portion of fecal material,Portion of fecal matter,Portion of feces,Portion of guano,Portion of scat,Portionem cacas,Scat,Spoor,Spraint,Stool,Teil der fäkalien@de,Feces,feces
Condition The experimental condition / phenotype studied according to the Experimental Factor Ontology
Reproductive behaviour measurement Reproductive behaviour measurement,reproductive behaviour measurement
Group 0 name Corresponds to the control (unexposed) group for case-control studies
L×Y (Landrace × Yorkshire sows)
Group 1 name Corresponds to the case (exposed) group for case-control studies
MS (Meishan sows)
Group 1 definition Diagnostic criteria applied to define the specific condition / phenotype represented in the case (exposed) group
Meishan sows were defined as the case group based on their breed-specific reproductive characteristics, including a significantly greater number of antral follicles and higher serum estradiol levels compared to Landrace x Yorkshire sows.
Group 0 sample size Number of subjects in the control (unexposed) group
7
Group 1 sample size Number of subjects in the case (exposed) group
7

Lab analysis

Sequencing type
16S
16S variable region One or more hypervariable region(s) of the bacterial 16S gene
V4
Sequencing platform Manufacturer and experimental platform used for quantifying microbial abundance
Illumina

Statistical Analysis

Data transformation Data transformation applied to microbial abundance measurements prior to differential abundance testing (if any).
relative abundances
Statistical test
LEfSe
Significance threshold p-value or FDR threshold used for differential abundance testing (if any)
0.05
MHT correction Have statistical tests be corrected for multiple hypothesis testing (MHT)?
No
LDA Score above Threshold for the linear discriminant analysis (LDA) score for studies using the popular LEfSe tool
2

Alpha Diversity

Shannon Estimator of species richness and species evenness: more weight on species richness
increased
Chao1 Abundance-based estimator of species richness
unchanged
Simpson Estimator of species richness and species evenness: more weight on species evenness
decreased
Richness Number of species
unchanged

Signature 1

Reviewed Marked as Reviewed by KateRasheed on 2025-6-3

Curated date: 2025/05/15

Curator: Anne-mariesharp

Revision editor(s): Anne-mariesharp

Source: Figure 5A, B

Description: LefSe analysis showing differentially abundant taxa between MS and L × Y sows

Abundance in Group 1: increased abundance in MS (Meishan sows)

NCBI Quality ControlLinks
Bacteroidaceae
Clostridiaceae
Fibrobacter
Oscillospira
Porphyromonadaceae
Spirochaetales
Turicibacteraceae
TuricibacteralesTuricibacterales
Spirochaetota

Revision editor(s): Anne-mariesharp

Signature 2

Reviewed Marked as Reviewed by KateRasheed on 2025-6-3

Curated date: 2025/05/15

Curator: Ese

Revision editor(s): Ese

Source: Figure 5A,B

Description: LefSe analysis showing differentially abundant taxa between MS and L × Y sows

Abundance in Group 1: decreased abundance in MS (Meishan sows)

NCBI Quality ControlLinks
Bacilli
Erysipelotrichaceae
Erysipelotrichales
Erysipelotrichia
Lachnospiraceae
Lactobacillales
Streptococcaceae
Veillonellaceae

Revision editor(s): Ese