Major urinary protein (Mup) gene family deletion drives sex-specific alterations on the house mouse gut microbiota

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Reviewed Marked as Reviewed by Svetlana up on 2025-1-31
study design
Citation
PMID PubMed identifier for scientific articles.
DOI Digital object identifier for electronic documents.
Authors
Real MVF, Colvin MS, Sheehan MJ, Moeller AH
Journal
bioRxiv : the preprint server for biology
Year
2023
The gut microbiota is shaped by host metabolism. In house mice (Mus musculus), major urinary protein (MUP) pheromone production represents a considerable energy investment, particularly in sexually mature males. Deletion of the Mup gene family shifts mouse metabolism towards an anabolic state, marked by lipogenesis, lipid accumulation, and body mass increases. Given the metabolic implications of MUPs, they may also influence the gut microbiota. Here, we investigated the effect of deletion of the Mup gene family on the gut microbiota of sexually mature mice. Shotgun metagenomics revealed distinct taxonomic and functional profiles between wildtype and knockout males, but not females. Deletion of the Mup gene cluster significantly reduced diversity in microbial families and functions in male mice. Additionally, specific taxa of the Ruminococcaceae family, which is associated with gut health and reduced risk of developing metabolic syndrome, and several microbial functions, such as transporters involved in vitamin B5 acquisition, were significantly depleted in the microbiota of Mup-knockout males. Altogether these results show that major urinary proteins significantly affect the gut microbiota of house mouse in a sex-specific manner.

Experiment 1


Reviewed Marked as Reviewed by Svetlana up on 2025-1-31

Curated date: 2024/03/19

Curator:

Revision editor(s):

Subjects

Location of subjects
United States of America
Host species Species from which microbiome was sampled. Contact us to have more species added.
Mus musculus
Body site Anatomical site where microbial samples were extracted from according to the Uber Anatomy Ontology
Feces Cow dung,Cow pat,Droppings,Dung,Excrement,Excreta,Faeces,Fecal material,Fecal matter,Fewmet,Frass,Guano,Matières fécales@fr,Merde@fr,Ordure,Partie de la merde@fr,Piece of shit,Porción de mierda@es,Portion of dung,Portion of excrement,Portion of faeces,Portion of fecal material,Portion of fecal matter,Portion of feces,Portion of guano,Portion of scat,Portionem cacas,Scat,Spoor,Spraint,Stool,Teil der fäkalien@de,Feces,feces
Condition The experimental condition / phenotype studied according to the Experimental Factor Ontology
Gene deletion library gene knockdown library,Gene repression library,Gene silencing library,Gene deletion library,gene deletion library
Group 0 name Corresponds to the control (unexposed) group for case-control studies
Wild Type Male Mice (WT male)
Group 1 name Corresponds to the case (exposed) group for case-control studies
Knock Out Male Mice (KO male)
Group 1 definition Diagnostic criteria applied to define the specific condition / phenotype represented in the case (exposed) group
Knockout male mice refers to laboratory mice whose gene has been genetically engineered to be inactive or "knocked out".
Group 0 sample size Number of subjects in the control (unexposed) group
4
Group 1 sample size Number of subjects in the case (exposed) group
6

Lab analysis

Sequencing type
WMS
16S variable region One or more hypervariable region(s) of the bacterial 16S gene
Not specified
Sequencing platform Manufacturer and experimental platform used for quantifying microbial abundance
Illumina

Statistical Analysis

Statistical test
ANCOM
Significance threshold p-value or FDR threshold used for differential abundance testing (if any)
0.001
MHT correction Have statistical tests be corrected for multiple hypothesis testing (MHT)?
Yes

Alpha Diversity

Pielou Quantifies how equal the community is numerically
unchanged
Shannon Estimator of species richness and species evenness: more weight on species richness
unchanged
Richness Number of species
unchanged

Signature 1

Needs review

Curated date: 2025/01/31

Curator: KateRasheed

Revision editor(s): KateRasheed, WikiWorks

Source: Fig. 3A, Table S5

Description: Differential abundance analyses with ANCOM-BC2

Abundance in Group 1: decreased abundance in

NCBI Quality ControlLinks
Ruminococcaceae GGB30296Ruminococcaceae GGB30296
Ruminococcaceae SGB43260Ruminococcaceae SGB43260

Revision editor(s): KateRasheed, WikiWorks