Effects of Glucagon-Like Peptide-1 Receptor Agonists on Gut Microbiota in Dehydroepiandrosterone-Induced Polycystic Ovary Syndrome Mice: Compared Evaluation of Liraglutide and Semaglutide Intervention/Experiment 2

From BugSigDB


Reviewed Marked as Reviewed by Svetlana up on 2025-1-30

Curated date: 2025/01/02

Curator: Victoria

Revision editor(s): Victoria

Subjects

Location of subjects
China
Host species Species from which microbiome was sampled. Contact us to have more species added.
Mus musculus
Body site Anatomical site where microbial samples were extracted from according to the Uber Anatomy Ontology
Feces Cow dung,Cow pat,Droppings,Dung,Excrement,Excreta,Faeces,Fecal material,Fecal matter,Fewmet,Frass,Guano,Matières fécales@fr,Merde@fr,Ordure,Partie de la merde@fr,Piece of shit,Porción de mierda@es,Portion of dung,Portion of excrement,Portion of faeces,Portion of fecal material,Portion of fecal matter,Portion of feces,Portion of guano,Portion of scat,Portionem cacas,Scat,Spoor,Spraint,Stool,Teil der fäkalien@de,Feces,feces
Condition The experimental condition / phenotype studied according to the Experimental Factor Ontology
Polycystic ovary syndrome Cystic disease of ovaries,hyperandrogenemia,Multicystic ovaries,multicystic ovaries,Ovarian Degeneration, Sclerocystic,Ovarian Syndrome, Polycystic,Ovarian Syndromes, Polycystic,Ovaries, Sclerocystic,Ovary Syndrome, Polycystic,Ovary, Sclerocystic,PCO - Polycystic ovaries,Pco1,PCOD - Polycystic ovarian disease,PCOS,Pcos,PCOS - Polycystic ovarian syndrome,PCOS1,Polycystic ovarian disease,polycystic ovarian disease,Polycystic ovarian syndrome,Polycystic ovaries,polycystic ovaries,Polycystic ovaries (disorder),polycystic ovary,polycystic ovary syndrome,polycystic ovary syndrome 1,Sclerocystic Ovarian Degeneration,Sclerocystic Ovaries,Sclerocystic Ovary,Sclerocystic Ovary Syndrome,Stein Leventhal Syndrome,Stein-Leventhal synd.,Stein-Leventhal Syndrome,Stein-Leventhal syndrome,Syndrome, Polycystic Ovary,Syndrome, Stein-Leventhal,Polycystic ovary syndrome
Group 0 name Corresponds to the control (unexposed) group for case-control studies
Polycystic ovary syndrome (PCOS) group
Group 1 name Corresponds to the case (exposed) group for case-control studies
Polycystic ovary syndrome + Liraglutide group (PCOS + Liraglutide)
Group 1 definition Diagnostic criteria applied to define the specific condition / phenotype represented in the case (exposed) group
Mice with Dehydroepiandrosterone (DHEA)-induced Polycystic ovary syndrome (PCOS) and then treated with liraglitude GLP-1RAs for 4 weeks.
Group 0 sample size Number of subjects in the control (unexposed) group
6
Group 1 sample size Number of subjects in the case (exposed) group
6

Lab analysis

Sequencing type
WMS
16S variable region One or more hypervariable region(s) of the bacterial 16S gene
Not specified
Sequencing platform Manufacturer and experimental platform used for quantifying microbial abundance
Illumina

Statistical Analysis

Data transformation Data transformation applied to microbial abundance measurements prior to differential abundance testing (if any).
relative abundances
Statistical test
LEfSe
Significance threshold p-value or FDR threshold used for differential abundance testing (if any)
0.05
MHT correction Have statistical tests be corrected for multiple hypothesis testing (MHT)?
No
LDA Score above Threshold for the linear discriminant analysis (LDA) score for studies using the popular LEfSe tool
3

Alpha Diversity

Simpson Estimator of species richness and species evenness: more weight on species evenness
decreased
Richness Number of species
decreased

Signature 1

Reviewed Marked as Reviewed by Svetlana up on 2025-1-30

Curated date: 2025/01/03

Curator: Victoria

Revision editor(s): Victoria

Source: Figure 3C

Description: LDA scores for the species abundance in the PCOS and PCOS+Liraglutide groups.

Abundance in Group 1: increased abundance in Polycystic ovary syndrome + Liraglutide group (PCOS + Liraglutide)

NCBI Quality ControlLinks
Duncaniella dubosii
Lachnospiraceae bacterium A4
Lachnospiraceae bacterium
Helicobacter ganmani
Bifidobacterium pseudolongum
Eubacterium sp. 14-2
Ileibacterium valens
Lactobacillus johnsonii
bacterium 1xD42-87
Alistipes muris
Dorea sp. 5-2
Lachnospiraceae bacterium A2
Flintibacter muris
Acutalibacter muris
Lachnospiraceae bacterium 10-1
Oscillibacter sp. 1-3
Oscillibacter sp. CU971
Muribaculaceae bacterium Isolate-080 (Janvier)
unclassified Eubacteriales
Firmicutes bacterium ASF500
Schaedlerella arabinosiphila
Sporofaciens musculi
Pseudoflavonifractor sp. 60
Otoolea muris
Colidextribacter sp. OB.20
Petralouisia muris
bacterium 1xD42-67
Faecalibaculum rodentium
Lachnospiraceae bacterium 3-1
Acetatifactor muris
unclassified Lachnospiraceae

Revision editor(s): Victoria

Signature 2

Reviewed Marked as Reviewed by Svetlana up on 2025-1-30

Curated date: 2025/01/03

Curator: Victoria

Revision editor(s): Victoria

Source: Figure 3C

Description: LDA scores for the species abundance in the PCOS and PCOS+Liraglutide groups.

Abundance in Group 1: decreased abundance in Polycystic ovary syndrome + Liraglutide group (PCOS + Liraglutide)

NCBI Quality ControlLinks
Lepagella muris
Muribaculaceae bacterium
Muribaculaceae bacterium Isolate-110 (HZI)
Muribaculaceae bacterium Isolate-013 (NCI)
Muribaculaceae bacterium Isolate-002 (NCI)
Muribaculaceae bacterium Isolate-004 (NCI)
Muribaculaceae bacterium Isolate-104 (HZI)
Muribaculaceae bacterium Isolate-102 (HZI)
Muribaculaceae bacterium Isolate-105 (HZI)
Muribaculaceae bacterium Isolate-037 (Harlan)
unclassified Bacteroidales
Bacteroides acidifaciens
unclassified Duncaniella
Muribaculum sp. NM65_B17
unclassified Enterobacteriaceae
Paramuribaculum intestinale
Escherichia coli
Prevotella sp. MGM2
Duncaniella muris
Parabacteroides distasonis
unclassified Bacteroides
Duncaniella freteri
Bacteroides stercorirosoris
unclassified Parabacteroides
Muribaculum gordoncarteri

Revision editor(s): Victoria