Effects of Glucagon-Like Peptide-1 Receptor Agonists on Gut Microbiota in Dehydroepiandrosterone-Induced Polycystic Ovary Syndrome Mice: Compared Evaluation of Liraglutide and Semaglutide Intervention/Experiment 3

From BugSigDB


Reviewed Marked as Reviewed by Svetlana up on 2025-1-30

Curated date: 2025/01/02

Curator: Victoria

Revision editor(s): Victoria

Subjects

Location of subjects
China
Host species Species from which microbiome was sampled. Contact us to have more species added.
Mus musculus
Body site Anatomical site where microbial samples were extracted from according to the Uber Anatomy Ontology
Feces Cow dung,Cow pat,Droppings,Dung,Excrement,Excreta,Faeces,Fecal material,Fecal matter,Fewmet,Frass,Guano,Matières fécales@fr,Merde@fr,Ordure,Partie de la merde@fr,Piece of shit,Porción de mierda@es,Portion of dung,Portion of excrement,Portion of faeces,Portion of fecal material,Portion of fecal matter,Portion of feces,Portion of guano,Portion of scat,Portionem cacas,Scat,Spoor,Spraint,Stool,Teil der fäkalien@de,Feces,feces
Condition The experimental condition / phenotype studied according to the Experimental Factor Ontology
Polycystic ovary syndrome Cystic disease of ovaries,hyperandrogenemia,Multicystic ovaries,multicystic ovaries,Ovarian Degeneration, Sclerocystic,Ovarian Syndrome, Polycystic,Ovarian Syndromes, Polycystic,Ovaries, Sclerocystic,Ovary Syndrome, Polycystic,Ovary, Sclerocystic,PCO - Polycystic ovaries,Pco1,PCOD - Polycystic ovarian disease,PCOS,Pcos,PCOS - Polycystic ovarian syndrome,PCOS1,Polycystic ovarian disease,polycystic ovarian disease,Polycystic ovarian syndrome,Polycystic ovaries,polycystic ovaries,Polycystic ovaries (disorder),polycystic ovary,polycystic ovary syndrome,polycystic ovary syndrome 1,Sclerocystic Ovarian Degeneration,Sclerocystic Ovaries,Sclerocystic Ovary,Sclerocystic Ovary Syndrome,Stein Leventhal Syndrome,Stein-Leventhal synd.,Stein-Leventhal Syndrome,Stein-Leventhal syndrome,Syndrome, Polycystic Ovary,Syndrome, Stein-Leventhal,Polycystic ovary syndrome
Group 0 name Corresponds to the control (unexposed) group for case-control studies
Polycystic ovary syndrome (PCOS) group
Group 1 name Corresponds to the case (exposed) group for case-control studies
Polycystic ovary syndrome + Semaglutide group (PCOS + Semaglutide)
Group 1 definition Diagnostic criteria applied to define the specific condition / phenotype represented in the case (exposed) group
Mice with Dehydroepiandrosterone (DHEA)-induced Polycystic ovary syndrome (PCOS) and then treated with Semaglutide GLP-1RAs for 4 weeks.
Group 0 sample size Number of subjects in the control (unexposed) group
6
Group 1 sample size Number of subjects in the case (exposed) group
6

Lab analysis

Sequencing type
WMS
16S variable region One or more hypervariable region(s) of the bacterial 16S gene
Not specified
Sequencing platform Manufacturer and experimental platform used for quantifying microbial abundance
Illumina

Statistical Analysis

Data transformation Data transformation applied to microbial abundance measurements prior to differential abundance testing (if any).
relative abundances
Statistical test
LEfSe
Significance threshold p-value or FDR threshold used for differential abundance testing (if any)
0.05
MHT correction Have statistical tests be corrected for multiple hypothesis testing (MHT)?
No
LDA Score above Threshold for the linear discriminant analysis (LDA) score for studies using the popular LEfSe tool
3

Alpha Diversity

Simpson Estimator of species richness and species evenness: more weight on species evenness
decreased
Richness Number of species
decreased

Signature 1

Reviewed Marked as Reviewed by Svetlana up on 2025-1-30

Curated date: 2025/01/03

Curator: Victoria

Revision editor(s): Victoria

Source: Figure 3D

Description: LDA scores for the species abundance in the PCOS and PCOS+Semaglutide groups.

Abundance in Group 1: increased abundance in Polycystic ovary syndrome + Semaglutide group (PCOS + Semaglutide)

NCBI Quality ControlLinks
unclassified Duncaniella
unclassified Helicobacter
Alistipes muris
Helicobacter sp. MIT 03-1616
Helicobacter typhlonius
Helicobacter japonicus
Faecalibaculum rodentium
Otoolea muris
Rikenella microfusus
Lachnospiraceae bacterium M18-1
Clostridium sp. MD294
Millionella massiliensis
Helicobacter hepaticus
Helicobacter sp. MIT 03-1614
unclassified Desulfovibrio
Senimuribacter intestinalis

Revision editor(s): Victoria

Signature 2

Reviewed Marked as Reviewed by Svetlana up on 2025-1-30

Curated date: 2025/01/03

Curator: Victoria

Revision editor(s): Victoria

Source: Figure 3D

Description: LDA scores for the species abundance in the PCOS and PCOS+Semaglutide groups.

Abundance in Group 1: decreased abundance in Polycystic ovary syndrome + Semaglutide group (PCOS + Semaglutide)

NCBI Quality ControlLinks
Acetivibrio sp. MSJd-27
Akkermansia muciniphila
Akkermansia muciniphila CAG:154
Alistipes communis
Alistipes finegoldii
Alistipes ihumii
Alistipes senegalensis
Alistipes sp. CAG:268
Bacteroidaceae bacterium
Bacteroidales bacterium
Bacteroides acidifaciens
Bacteroides faecichinchillae
Bacteroides finegoldii
Bacteroides nordii
Bacteroides ovatus
Bacteroides sp. CAG:927
Bacteroides stercorirosoris
Bacteroides uniformis
Bacteroides xylanisolvens
Blautia pseudococcoides
Burkholderiales bacterium
Escherichia coli
Muribaculaceae bacterium
Muribaculaceae bacterium Isolate-002 (NCI)
Muribaculaceae bacterium Isolate-037 (Harlan)
Muribaculaceae bacterium Isolate-110 (HZI)
Muribaculum intestinale
Odoribacter splanchnicus
Parabacteroides distasonis
Parabacteroides goldsteinii
Parabacteroides gordonii
Paraprevotella clara
Paraprevotella xylaniphila
Parasutterella excrementihominis
Phocaeicola sartorii
Phocaeicola vulgatus
Prevotella sp. CAG:1185
Prevotella sp. MGM2
Proteus mirabilis
Romboutsia ilealis
Segatella copri
Tannerella forsythia
unclassified Bacillota
unclassified Bacteroidales
unclassified Bacteroides
unclassified Enterobacterales
unclassified Enterobacteriaceae
unclassified Escherichia
unclassified Gammaproteobacteria
unclassified Parabacteroides
unclassified Proteus (in: enterobacteria)
unclassified Rikenellaceae
unclassified Turicibacter
Alistipes timonensis
unclassified Bacteroidaceae
Parabacteroides chinchillae
Gallalistipes aquisgranensis
Marseilla massiliensis
uncultured bacterium BAC10G6
Intestinimonas massiliensis (ex Liu et al. 2021)
Alistipes sp. An66
Candidatus Contubernalis alkalaceticus
Lawsonibacter celer

Revision editor(s): Victoria