Microbiota composition in bilateral healthy breast tissue and breast tumors/Experiment 2/Signature 2

From BugSigDB
Needs review

Curated date: 2025/06/19

Curator: Ecsharp

Revision editor(s): Ecsharp

Source: Online Resource 3

Description: A total of 131 OTUs were identified as significantly associated with tissue group (normal or tumor) through a generalized linear mixed effects model with individual subject as the random effect and disease status as the fixed effect. The most specific level of taxonomic classification is reported for each OTU. A positive coefficient indicates the OTU is more abundant in normal tissue and a negative coefficient indicates the OTU is more abundant in tumor tissue.

Abundance in Group 1: decreased abundance in Tumor Breast Tissue

NCBI Quality ControlLinks
Oscillospiraceae
Rikenellaceae
Butyricimonas
Sutterella
Akkermansia
Bacteroides
Gemellaceae
Bacteroidales
Pseudomonadaceae
Parabacteroides
Varibaculum
Eubacteriales
Rothia
Eubacterium
Anaerovoracaceae
Oxalobacter
Oscillospira
Faecalibacterium
Holdemania
Blautia
Lachnospiraceae
Staphylococcus
Enterobacteriaceae
Neisseriaceae
Acidaminococcus
Desulfovibrio
Ruminococcus
Peptococcaceae
clostridialesclostridiales

Revision editor(s): Ecsharp