SARS-CoV-2 infection and viral load are associated with the upper respiratory tract microbiome/Experiment 1/Signature 1

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Reviewed Marked as Reviewed by Peace Sandy on 2024-1-15

Curated date: 2021/07/10

Curator: Claregrieve1

Revision editor(s): Claregrieve1, Peace Sandy, WikiWorks

Source: Figure 3B

Description: Differences in the abundance of taxa of the URT microbiome between adults with and without SARS�CoV-2 infection. Differential abundance testing was conducted using DESeq2 models at the ASV level including age and sex as covariates B, Bar plot depicting the log2 FCs and SEs for ASVs that were significantly different between groups.

Abundance in Group 1: increased abundance in Symptomatic, mild to moderate COVID-19 patients

NCBI	Quality Control	Links
Anaerococcus sp.
Brevundimonas sp.
Campylobacter hominis
Corynebacterium imitans
Corynebacterium sp.
Ezakiella
Granulicatella sp.
Peptoniphilus lacrimalis
Peptoniphilus sp.
Phocaeicola vulgatus
Segatella copri
Sphingobacterium spiritivorum

Revision editor(s): Claregrieve1, Peace Sandy, WikiWorks