Trans-ethnic gut microbial signatures of prediabetic subjects from India and Denmark/Experiment 4/Signature 1

From BugSigDB
Reviewed Marked as Reviewed by Svetlana up on 2024-12-20

Curated date: 2024/11/05

Curator: KateRasheed

Revision editor(s): KateRasheed, WikiWorks, Tosin

Source: Additional file 9: Table S7

Description: Differentially abundant taxa between NG and PD subjects, belonging to the Indian and Danish cohorts (pooled together) identified using a negative binomial Wald test (corrected for geography specific cohort effect).

Abundance in Group 1: increased abundance in Prediabetes (PD) - Indian & Danish Cohorts

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Adlercreutzia
Agathobacter
Agathobaculum desmolans
Alistipes inops
Alloprevotella
Anaerotruncus colihominis
Bacteroides
Bacteroides intestinalis
Blautia
Blautia faecis
Blautia massiliensis (ex Liu et al. 2021)
Blautia wexlerae
Candidatus Obscuribacterales
Collinsella
Coprococcus
Coprococcus comes
Dialister
Dorea formicigenerans
Dorea longicatena
Eisenbergiella
Enterobacter
Enterorhabdus
Faecalibacterium
Fusicatenibacter saccharivorans
Holdemanella
Intestinibacter bartlettii
Intestinimonas
Lachnoclostridium
Lachnospira
Lachnospira pectinoschiza
Lachnospiraceae
Lactobacillus
Lactobacillus delbrueckii
Ligilactobacillus ruminis
Megasphaera
Mitsuokella
Negativibacillus
Oscillibacter
Oscillospiraceae
Peptococcaceae
Rhodococcus
Roseburia
Senegalimassilia
Streptococcus
Subdoligranulum
Sutterella
Thomasclavelia
Veillonella
Veillonella atypica
Veillonella dispar
Veillonella parvula
Veillonella tobetsuensis
Vibrio cholerae
uncultured Oscillospiraceae bacterium
Ruminococcaceae_UCG-0013Ruminococcaceae_UCG-0013
Ruminiclostridium_9Ruminiclostridium_9
Bifidobacterium adolescentis/faecale/stercorisBifidobacterium adolescentis/faecale/stercoris
Ruminiclostridium_5Ruminiclostridium_5
Klebsiella aerogenes/oxytoca/pneumoniaeKlebsiella aerogenes/oxytoca/pneumoniae
Rhodococcus baikonurensis/boritolerans/degradans/erythropolis/globerulus/hoagii/opacus/qingshengii/rhodochrousRhodococcus baikonurensis/boritolerans/degradans/erythropolis/globerulus/hoagii/opacus/qingshengii/rhodochrous
Alistipes finegoldii/onderdonkiiAlistipes finegoldii/onderdonkii
Lactobacillus acidophilus/casei/crispatus/kitasatonisLactobacillus acidophilus/casei/crispatus/kitasatonis
Achromobacter insolitus/xylosoxidansAchromobacter insolitus/xylosoxidans
Prevotella_9Prevotella_9
Christensenellaceae_R-7_groupChristensenellaceae_R-7_group
Escherichia/Shigella albertii/boydii/coli/dysenteriae/fergusonii/flexneri/sonnei/vulnerisEscherichia/Shigella albertii/boydii/coli/dysenteriae/fergusonii/flexneri/sonnei/vulneris
Prevotella_2Prevotella_2
Staphylococcus epidermidis/haemolyticus/hominisStaphylococcus epidermidis/haemolyticus/hominis
Lactobacillus fermentum/mucosaeLactobacillus fermentum/mucosae
Veillonella dispar/parvulaVeillonella dispar/parvula
Enterococcus azikeevi/durans/faecalis/faecium/hirae/lactis/mundtii/raffinosus/ratti/thailandicus/villorumEnterococcus azikeevi/durans/faecalis/faecium/hirae/lactis/mundtii/raffinosus/ratti/thailandicus/villorum
Ruminococcaceae bacterium UCG-005

Revision editor(s): KateRasheed, WikiWorks, Tosin