Enteric nervous system damage caused by abnormal intestinal butyrate metabolism may lead to functional constipation/Experiment 2/Signature 2

From BugSigDB
Reviewed Marked as Reviewed by KateRasheed on 2025-7-10

Curated date: 2025/04/17

Curator: Tosin

Revision editor(s): Tosin, Victoria

Source: Figure 1E, Table S4, Figure S3b

Description: Significanf different bacteria genus, species among the four groups obtained via Deseq2 in the comparison between groups 2 and 3

Abundance in Group 1: decreased abundance in Group 3

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Acidaminococcus
Acidaminococcus sp. CAG:542
Alistipes sp. CAG:435
Alistipes sp. CAG:831
Anaerobutyricum hallii
Anaerostipes caccae
Anaerostipes hadrus
Azospirillum
Azospirillum sp. CAG:239
Azospirillum sp. CAG:260
Bacteroides cellulosilyticus
Bacteroides cellulosilyticus CAG:158
Bacteroides eggerthii
Bacteroides eggerthii CAG:109
Bacteroides faecis CAG:32
Bacteroides finegoldii
Bacteroides finegoldii CAG:203
Bacteroides fragilis
Bacteroides fragilis CAG:47
Bacteroides fragilis CAG:558
Bacteroides gallinarum
Bacteroides helcogenes
Bacteroides nordii
Bacteroides oleiciplenus
Bacteroides ovatus
Bacteroides ovatus CAG:22
Bacteroides pyogenes
Bacteroides reticulotermitis
Bacteroides salyersiae
Bacteroides sp. 14(A)
Bacteroides sp. 1_1_30
Bacteroides sp. 2_1_22
Bacteroides sp. 2_2_4
Bacteroides sp. 3_1_23
Bacteroides sp. 3_1_33FAA
Bacteroides sp. 3_1_40A
Bacteroides sp. 4_1_36
Bacteroides sp. 4_3_47FAA
Bacteroides sp. 9_1_42FAA
Bacteroides sp. CAG:189
Bacteroides sp. CAG:462
Bacteroides sp. CAG:530
Bacteroides sp. CAG:598
Bacteroides sp. CAG:633
Bacteroides sp. CAG:702
Bacteroides sp. CAG:714
Bacteroides sp. CAG:754
Bacteroides sp. CAG:875
Bacteroides sp. CAG:98
Bacteroides sp. D1
Bacteroides sp. D2
Bacteroides sp. D20
Bacteroides sp. D22
Bacteroides sp. HPS0048
Bacteroides stercorirosoris
Bacteroides stercoris
Bacteroides stercoris CAG:120
Bacteroides thetaiotaomicron
Bacteroides timonensis
Bacteroides uniformis
Bacteroides uniformis CAG:3
Bacteroides xylanisolvens
Barnesiella viscericola
Bifidobacterium bifidum
Bifidobacterium breve
Bifidobacterium catenulatum subsp. kashiwanohense
Bifidobacterium longum
Bifidobacterium pseudocatenulatum
Bifidobacterium pseudocatenulatum CAG:263
Blautia hansenii
Blautia obeum
Blautia producta
Blautia sp. CAG:257
Blautia sp. CAG:37
Blautia sp. CAG:52
Blautia sp. KLE 1732
Campylobacter jejuni
Catonella morbi
Clostridiales bacterium 1_7_47FAA
Clostridiales bacterium VE202-06
Clostridiales bacterium VE202-14
Clostridiales bacterium VE202-26
Clostridiales bacterium VE202-28
Clostridium botulinum
Clostridium butyricum
Clostridium sp. CAG:230
Clostridium sp. CAG:253
Clostridium sp. CAG:299
Clostridium sp. CAG:411
Clostridium sp. CAG:505
Clostridium sp. CAG:7
Clostridium sp. CAG:81
Clostridium sp. CAG:91
Clostridium sp. SS2/1
Coprobacillus sp. CAG:235
Coprobacter fastidiosus
Coprococcus comes
Coprococcus sp. HPP0048
Coprococcus sp. HPP0074
Cutibacterium acnes
Dialister invisus
Dorea formicigenerans
Dorea longicatena
Dorea longicatena CAG:42
Dorea sp. 5-2
Dorea sp. AGR2135
Dorea sp. CAG:317
Enterocloster bolteae
Enterocloster bolteae CAG:59
Erysipelothrix rhusiopathiae
Escherichia
Escherichia coli
Escherichia fergusonii
Eubacterium ramulus
Eubacterium sp. 3_1_31
Eubacterium sp. CAG:248
Eubacterium sp. CAG:252
Eubacterium sp. CAG:274
Eubacterium sp. CAG:38
Eubacterium sp. CAG:76
Eubacterium sp. CAG:86
Eubacterium ventriosum
Firmicutes bacterium CAG:212
Firmicutes bacterium CAG:227
Firmicutes bacterium CAG:41
Firmicutes bacterium CAG:424
Firmicutes bacterium CAG:882
Fusobacterium
Fusobacterium mortiferum
Fusobacterium nucleatum
Fusobacterium ulcerans
Fusobacterium varium
Haemophilus
Haemophilus parainfluenzae
Hallella bergensis
Hallella multisaccharivorax
Hallella seregens
Halobacillus trueperi
Hoylesella buccalis
Hoylesella timonensis
Intestinibacter bartlettii
Klebsiella aerogenes
Klebsiella pneumoniae
Klebsiella sp. MS 92-3
Klebsiella variicola
Lachnospiraceae bacterium 1 4 56FAA
Lachnospiraceae bacterium 2 1 46FAA
Lachnospiraceae bacterium 2_1_58FAA
Lachnospiraceae bacterium 5_1_63FAA
Lachnospiraceae bacterium 6_1_37FAA
Lachnospiraceae bacterium 9_1_43BFAA
Lachnospiraceae bacterium A2
Lachnospiraceae bacterium A4
Lachnospiraceae bacterium CAG:25
Lactobacillus delbrueckii
Ligilactobacillus ruminis
Mediterraneibacter gnavus
Mediterraneibacter gnavus CAG:126
Megamonas
Megamonas funiformis
Megamonas funiformis CAG:377
Megamonas hypermegale
Megamonas rupellensis
Megasphaera elsdenii
Mitsuokella multacida
Odoribacter laneus
Parabacteroides sp. CAG:409
Parabacteroides sp. HGS0025
Parvimonas micra
Phascolarctobacterium sp. CAG:207
Phascolarctobacterium sp. CAG:266
Phocaeicola barnesiae
Phocaeicola coprophilus
Phocaeicola coprophilus CAG:333
Phocaeicola dorei
Phocaeicola dorei CAG:222
Phocaeicola massiliensis
Phocaeicola plebeius
Phocaeicola plebeius CAG:211
Phocaeicola salanitronis
Phocaeicola sartorii
Phocaeicola vulgatus
Phocaeicola vulgatus CAG:6
Prevotella amnii
Prevotella bivia
Prevotella dentalis
Prevotella disiens
Prevotella histicola
Prevotella sp. AGR2160
Prevotella sp. BV3P1
Prevotella sp. CAG:1092
Prevotella sp. CAG:1124
Prevotella sp. CAG:1185
Prevotella sp. CAG:1320
Prevotella sp. CAG:255
Prevotella sp. CAG:386
Prevotella sp. CAG:474
Prevotella sp. CAG:5226
Prevotella sp. CAG:604
Prevotella sp. CAG:732
Prevotella sp. CAG:891
Prevotella sp. CAG:924
Prevotella sp. S7-1-8
Roseburia intestinalis
Roseburia inulinivorans
Roseburia inulinivorans CAG:15
Roseburia sp. CAG:303
Roseburia sp. CAG:45
Roseburia sp. CAG:50
Ruminiclostridium papyrosolvens
Ruminococcus sp. CAG:17
Ruminococcus sp. CAG:55
Ruminococcus sp. CAG:60
Ruminococcus sp. CAG:90
Ruminococcus sp. SR1/5
Salmonella enterica
Segatella albensis
Segatella baroniae
Segatella buccae
Segatella copri
Segatella copri CAG:164
Segatella maculosa
Segatella oris
Segatella paludivivens
Segatella salivae
Shigella
Shigella dysenteriae
Shigella flexneri
Staphylococcus aureus
Streptococcus agalactiae
Streptococcus parasanguinis
Streptococcus pneumoniae
Streptococcus salivarius
Streptococcus thermophilus
Succinatimonas
Succinatimonas sp. CAG:777
Sutterella parvirubra
Sutterella wadsworthensis
Sutterella wadsworthensis CAG:135
Tannerella sp. 6_1_58FAA_CT1
Tannerella sp. CAG:51
Thermobrachium celere
Veillonella atypica
Veillonella magna
Veillonella parvula
Xylanibacter oryzae
Xylanibacter ruminicola
[Bacteroides] pectinophilus
[Clostridium] clostridioforme CAG:132
[Clostridium] nexile
[Clostridium] nexile CAG:348
[Clostridium] scindens
[Ruminococcus] lactaris
[Ruminococcus] torques
bacterium LF-3
butyrate-producing bacterium SS3/4
unclassified Acidaminococcus
unclassified Bacteria
unclassified Bacteroidales
unclassified Bacteroides
unclassified Dorea
unclassified Enterobacter
unclassified Enterobacteriaceae
unclassified Erysipelotrichaceae
unclassified Escherichia
unclassified Lachnoclostridium
unclassified Megamonas
unclassified Megasphaera
unclassified Porphyromonadaceae
unclassified Prevotella
unclassified Roseburia
unclassified Streptococcus
unclassified Sutterella
unclassified Veillonella
unclassified sequences
uncultured bacterium
Bacteroides sp. 2_1_56FAABacteroides sp. 2_1_56FAA
Bacteroides sp. 2_1_16Bacteroides sp. 2_1_16
Prevotella sp. P4-76Prevotella sp. P4-76
Clostridium sp. JCCClostridium sp. JCC
Prevotella sp. P5-60Prevotella sp. P5-60

Revision editor(s): Tosin, Victoria