Gut microbiota differences in stunted and normal-lenght children aged 36-45 months in East Nusa Tenggara, Indonesia/Experiment 7
From BugSigDB
Reviewed Marked as Reviewed by KateRasheed on 2025-8-20
Subjects
- Location of subjects
- Indonesia
- Host species Species from which microbiome was sampled. Contact us to have more species added.
- Homo sapiens
- Body site Anatomical site where microbial samples were extracted from according to the Uber Anatomy Ontology
- Feces Cow dung,Cow pat,Droppings,Dung,Excrement,Excreta,Faeces,Fecal material,Fecal matter,Fewmet,Frass,Guano,Matières fécales@fr,Merde@fr,Ordure,Partie de la merde@fr,Piece of shit,Porción de mierda@es,Portion of dung,Portion of excrement,Portion of faeces,Portion of fecal material,Portion of fecal matter,Portion of feces,Portion of guano,Portion of scat,Portionem cacas,Scat,Spoor,Spraint,Stool,Teil der fäkalien@de,Feces,feces
- Condition The experimental condition / phenotype studied according to the Experimental Factor Ontology
- Body mass index BMI,Quetelet's Index,Body mass index,body mass index
- Group 0 name Corresponds to the control (unexposed) group for case-control studies
- Low Body Mass Index
- Group 1 name Corresponds to the case (exposed) group for case-control studies
- High Body Mass Index
- Group 1 definition Diagnostic criteria applied to define the specific condition / phenotype represented in the case (exposed) group
- Children with high Body Mass Index (BMI) aged 36-45 months
Lab analysis
- Sequencing type
- 16S
- 16S variable region One or more hypervariable region(s) of the bacterial 16S gene
- V3-V4
- Sequencing platform Manufacturer and experimental platform used for quantifying microbial abundance
- Illumina
Statistical Analysis
- Data transformation Data transformation applied to microbial abundance measurements prior to differential abundance testing (if any).
- relative abundances
- Statistical test
- Spearman Correlation
- Significance threshold p-value or FDR threshold used for differential abundance testing (if any)
- 0.05
- MHT correction Have statistical tests be corrected for multiple hypothesis testing (MHT)?
- Yes
Signature 1
Reviewed Marked as Reviewed by KateRasheed on 2025-8-20
Source: Figure 6a
Description: Heatmap of the taxa at genus level that were different (q < 0.05) when correlated by Spearman correlation analysis to the BMI. Positive correlation; red: Negative correlation
Abundance in Group 1: increased abundance in High Body Mass Index
Signature 2
Reviewed Marked as Reviewed by KateRasheed on 2025-8-20
Source: Figure 6a
Description: Heatmap of the taxa at genus level that were different (q < 0.05) when correlated by Spearman correlation analysis to the BMI. Positive correlation; red: Negative correlation
Abundance in Group 1: decreased abundance in High Body Mass Index
