Property:Sequencing platform
From BugSigDB
This is a property of type Text.
Manufacturer and experimental platform used for quantifying microbial abundance (en)
Allowed values[edit source]
- DNA-DNA Hybridization
- Human Intestinal Tract Chip
- Illumina
- Ion Torrent
- Mass spectrometry
- Non-quantitative PCR
- PacBio Vega (VS)/Revio (RS)/Sequel II
- PhyloChip
- Roche454
- RT-qPCR
- Sanger
- Nanopore
- BGISEQ-500 Sequencing
- DNBSEQ-T7
- MGISEQ-2000
- HTF-Microbi.Array
- 2b-RAD
0–9
Illumina +
Illumina +
16S rRNA amplicon sequencing identifies microbiota associated with oral cancer, human papilloma virus infection and surgical treatment/Experiment 1 +
Roche454 +
16S rRNA amplicon sequencing identifies microbiota associated with oral cancer, human papilloma virus infection and surgical treatment/Experiment 2 +
Roche454 +
16S rRNA amplicon sequencing identifies microbiota associated with oral cancer, human papilloma virus infection and surgical treatment/Experiment 3 +
Roche454 +
16S rRNA and metagenomic shotgun sequencing data revealed consistent patterns of gut microbiome signature in pediatric ulcerative colitis/Experiment 1 +
Illumina +
16S rRNA gene amplicon sequencing of gut microbiota in gestational diabetes mellitus and their correlation with disease risk factors/Experiment 1 +
Illumina +
16S rRNA gene pyrosequencing reveals shift in patient faecal microbiota during high-dose chemotherapy as conditioning regimen for bone marrow transplantation/Experiment 1 +
Roche454 +
Ion Torrent +
Ion Torrent +
Ion Torrent +
16S rRNA gene sequencing reveals altered composition of gut microbiota in individuals with kidney stones/Experiment 1 +
Illumina +
16S rRNA gene sequencing reveals altered composition of gut microbiota in individuals with kidney stones/Experiment 2 +
Illumina +
16S rRNA gene sequencing reveals altered gut microbiota in young adults with schizophrenia and prominent negative symptoms/Experiment 1 +
Illumina +
16S rRNA gene sequencing reveals altered gut microbiota in young adults with schizophrenia and prominent negative symptoms/Experiment 2 +
Illumina +
A
A Combined Analysis of Gut and Skin Microbiota in Infants with Food Allergy and Atopic Dermatitis: A Pilot Study/Experiment 1 +
Illumina +
A Combined Analysis of Gut and Skin Microbiota in Infants with Food Allergy and Atopic Dermatitis: A Pilot Study/Experiment 2 +
Illumina +
Showing 10 related entities (more are available).
G
- Gut microbiota-derived gamma-aminobutyric acid improves host appetite by inhibiting satiety hormone secretion/Experiment 1 +
- Gut microbiota-derived metabolites mediate the neuroprotective effect of melatonin in cognitive impairment induced by sleep deprivation/Experiment 3 +
- Gut microbiota-derived metabolites mediate the neuroprotective effect of melatonin in cognitive impairment induced by sleep deprivation/Experiment 1 +
I
- Irisin alleviated the reproductive endocrinal disorders of PCOS mice accompanied by changes in gut microbiota and metabolomic characteristics/Experiment 5 +
P
- Profiling the oral microbiomes in patients with Alzheimer's disease/Experiment 7 +
- Profiling the oral microbiomes in patients with Alzheimer's disease/Experiment 6 +
- Profiling the oral microbiomes in patients with Alzheimer's disease/Experiment 8 +
- Profiles of subgingival microbiomes and gingival crevicular metabolic signatures in patients with amnestic mild cognitive impairment and Alzheimer's disease/Experiment 3 +
- ...
S
- Salivary microbiome profiles for different clinical phenotypes of pituitary adenomas by single-molecular long-read sequencing/Experiment 1 +
T
{ "type": "PROPERTY_CONSTRAINT_SCHEMA", "constraints": { "type_constraint": "_txt", "allowed_values": [ "DNA-DNA Hybridization", "Human Intestinal Tract Chip", "Illumina", "Ion Torrent", "Non-quantitative PCR", "PhyloChip", "Roche454", "RT-qPCR", "Mass spectrometry", "Nanopore", "BGISEQ-500 Sequencing", "DNBSEQ-T7", "MGISEQ-2000", "HTF-Microbi.Array", "Sanger", "2b-RAD", "PacBio Vega (VS)/Revio (RS)/Sequel II" ] } }