Oral and gut microbiome profiles in people with early idiopathic Parkinson's disease/Experiment 5/Signature 2

From BugSigDB
Needs review

Curated date: 2024/11/07

Curator: KateRasheed

Revision editor(s): KateRasheed

Source: Supplementary Data 2

Description: Significant differentially abundant OTU-level microbial taxa(oral microbiota) between controls and PD cases using linear models statistical test.

Abundance in Group 1: decreased abundance in Parkinson’s disease patients (PD patients)

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Actinomyces sp. HMSC035G02
Actinomyces sp. oral taxon 172 str. F0311
Fusobacterium periodonticum 1_1_41FAA
Fusobacterium periodonticum ATCC 33693
Fusobacterium periodonticum D10
Granulicatella sp. 572.rep1_STHE
Haemophilus sp. HMSC71H05
Hoylesella loescheii DSM 19665 = JCM 12249 = ATCC 15930
Hoylesella nanceiensis DSM 19126 = JCM 15639
Lachnoanaerobaculum sp. OBRC5-5
Leptotrichia sp. oral taxon 215 str. W9775
Neisseria sp. HMSC061B04
Neisseria sp. HMSC061H08
Neisseria sp. HMSC063B05
Neisseria sp. HMSC064F03
Neisseria sp. HMSC066F04
Neisseria sp. HMSC067H04
Neisseria sp. HMSC068C04
Neisseria sp. HMSC068C12
Neisseria sp. HMSC071A01
Neisseria sp. HMSC072F04
Neisseria sp. HMSC075C12
Neisseria sp. HMSC078C12
Neisseria sp. HMSC15G01
Oribacterium asaccharolyticum ACB7
Oribacterium parvum ACB1
Porphyromonas sp. KLE 1280
Rothia sp. HMSC061E04
Rothia sp. HMSC068E02
Rothia sp. HMSC069C03
Rothia sp. HMSC076D04
Solobacterium moorei DSM 22971
Streptococcus australis ATCC 700641
Streptococcus infantis ATCC 700779
Streptococcus peroris ATCC 700780
Streptococcus sp. 1171_SSPC
Streptococcus sp. 263_SSPC
Streptococcus sp. 400_SSPC
Streptococcus sp. A12
Streptococcus sp. HMSC034E03
Streptococcus sp. HMSC057E02
Streptococcus sp. HMSC062D07
Streptococcus sp. HMSC067H01
Streptococcus sp. HMSC34B10
Streptococcus sp. HPH0090
Actinomyces_bouchesdurhonensis_Marseille.P2825Actinomyces_bouchesdurhonensis_Marseille.P2825
Mogibacterium diversum CCUG 47132Mogibacterium diversum CCUG 47132
Gemella_sanguinis_UMB0186Gemella_sanguinis_UMB0186
Actinomyces_odontolyticus_UMB0018Actinomyces_odontolyticus_UMB0018
Fusobacterium_periodonticum_KCOM_2305Fusobacterium_periodonticum_KCOM_2305
Fusobacterium_periodonticum_KCOM_2555Fusobacterium_periodonticum_KCOM_2555
Fusobacterium_periodonticum_KCOM_1277Fusobacterium_periodonticum_KCOM_1277
Fusobacterium_periodonticum_KCOM_1283Fusobacterium_periodonticum_KCOM_1283
Fusobacterium_periodonticum_KCOM_1261Fusobacterium_periodonticum_KCOM_1261
Capnocytophaga_gingivalis_H1496Capnocytophaga_gingivalis_H1496
Rothia sp. HMSC061C12
Haemophilus sp. HMSC068C11
Neisseria sp. HMSC073G10
Streptococcus sp. HMSC071D03
Streptococcus sp. HMSC056C01
Haemophilus sp. HMSC061E01
Neisseria sp. HMSC070A01
Neisseria sp. HMSC058F07
Prevotella scopos JCM 17725
Haemophilus sp. CCUG 60358
Streptococcus_infantis_DD18Streptococcus_infantis_DD18
Streptococcus_sp._oral_taxon_431_F0610_.5.114.Streptococcus_sp._oral_taxon_431_F0610_.5.114.
Actinomyces_odontolyticus_XH001Actinomyces_odontolyticus_XH001
Fusobacterium_nucleatum_ChDC_F306Fusobacterium_nucleatum_ChDC_F306
Leptotrichia_sp._oral_taxon_212_W10393Leptotrichia_sp._oral_taxon_212_W10393
Eubacterium sulci ATCC 35585
Eikenella_corrodens_491_NMENEikenella_corrodens_491_NMEN
Streptococcus_pseudopneumoniae_469_SPSEStreptococcus_pseudopneumoniae_469_SPSE
Streptococcus_pseudopneumoniae_434_SPSEStreptococcus_pseudopneumoniae_434_SPSE
Xylanimonas_cellulosilytica_352_XCELXylanimonas_cellulosilytica_352_XCEL
Streptococcus_pseudopneumoniae_1271.rep1_SPSEStreptococcus_pseudopneumoniae_1271.rep1_SPSE
Sanguibacter_keddieii_250_SKEDSanguibacter_keddieii_250_SKED
Rothia_mucilaginosa_509_RMUCRothia_mucilaginosa_509_RMUC
Haemophilus_influenzae_156_HINFHaemophilus_influenzae_156_HINF
Haemophilus_parainfluenzae_1128_HPARHaemophilus_parainfluenzae_1128_HPAR
Haemophilus_parainfluenzae_146_HPARHaemophilus_parainfluenzae_146_HPAR
Haemophilus_parainfluenzae_1209_HPARHaemophilus_parainfluenzae_1209_HPAR
Gemella sanguinis ATCC 700632
Streptococcus_sp._I.G2Streptococcus_sp._I.G2
Streptococcus_sp._I.P16Streptococcus_sp._I.P16
Prevotella melaninogenica D18
Granulicatella adiacens ATCC 49175
Veillonella dispar ATCC 17748
Actinomyces_odontolyticus_ATCC_17982Actinomyces_odontolyticus_ATCC_17982
Prevotella melaninogenica ATCC 25845

Revision editor(s): KateRasheed