Trans-ethnic gut microbial signatures of prediabetic subjects from India and Denmark/Experiment 4/Signature 1

From BugSigDB
Reviewed Marked as Reviewed by Svetlana up on 2024-12-20

Curated date: 2024/11/05

Curator: KateRasheed

Revision editor(s): KateRasheed

Source: Additional file 9: Table S7

Description: Differentially abundant taxa between NG and PD subjects, belonging to the Indian and Danish cohorts (pooled together) identified using a negative binomial Wald test (corrected for geography specific cohort effect).

Abundance in Group 1: increased abundance in Prediabetes (PD) - Indian & Danish Cohorts

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Coprococcus comes
Dorea longicatena
Fusicatenibacter saccharivorans
Dorea formicigenerans
Subdoligranulum
Lachnospiraceae
Blautia
Blautia massiliensis (ex Liu et al. 2021)
Faecalibacterium
Lachnoclostridium
Ruminococcaceae_UCG-005Ruminococcaceae_UCG-005
Ruminococcaceae_UCG-0013Ruminococcaceae_UCG-0013
Blautia faecis
Coprococcus
Lachnospira
Lachnospira pectinoschiza
Intestinimonas
Streptococcus
Agathobacter
Ligilactobacillus ruminis
Oscillospiraceae
Ruminiclostridium_9Ruminiclostridium_9
Senegalimassilia
Intestinibacter bartlettii
Bacteroides
Megasphaera
Roseburia
Bifidobacterium adolescentis/faecale/stercorisBifidobacterium adolescentis/faecale/stercoris
Ruminiclostridium_5Ruminiclostridium_5
Lactobacillus
Klebsiella aerogenes/oxytoca/pneumoniaeKlebsiella aerogenes/oxytoca/pneumoniae
Enterorhabdus
Rhodococcus baikonurensis/boritolerans/degradans/erythropolis/globerulus/hoagii/opacus/qingshengii/rhodochrousRhodococcus baikonurensis/boritolerans/degradans/erythropolis/globerulus/hoagii/opacus/qingshengii/rhodochrous
Rhodococcus
Alistipes inops
Agathobaculum desmolans
Alistipes finegoldii/onderdonkiiAlistipes finegoldii/onderdonkii
Lactobacillus acidophilus/casei/crispatus/kitasatonisLactobacillus acidophilus/casei/crispatus/kitasatonis
Adlercreutzia
Achromobacter insolitus/xylosoxidansAchromobacter insolitus/xylosoxidans
Mitsuokella
Negativibacillus
Blautia wexlerae
Prevotella_9Prevotella_9
Peptococcaceae
Collinsella
Holdemanella
Lactobacillus delbrueckii
Veillonella tobetsuensis
Oscillibacter
Dialister
Anaerotruncus colihominis
Christensenellaceae_R-7_groupChristensenellaceae_R-7_group
Sutterella
Thomasclavelia
Escherichia/Shigella albertii/boydii/coli/dysenteriae/fergusonii/flexneri/sonnei/vulnerisEscherichia/Shigella albertii/boydii/coli/dysenteriae/fergusonii/flexneri/sonnei/vulneris
Veillonella atypica
Prevotella_2Prevotella_2
Bacteroides intestinalis
Eisenbergiella
uncultured Oscillospiraceae bacterium
Candidatus Obscuribacterales
Enterobacter
Veillonella dispar
Staphylococcus epidermidis/haemolyticus/hominisStaphylococcus epidermidis/haemolyticus/hominis
Alloprevotella
Lactobacillus fermentum/mucosaeLactobacillus fermentum/mucosae
Veillonella
Veillonella dispar/parvulaVeillonella dispar/parvula
Enterococcus azikeevi/durans/faecalis/faecium/hirae/lactis/mundtii/raffinosus/ratti/thailandicus/villorumEnterococcus azikeevi/durans/faecalis/faecium/hirae/lactis/mundtii/raffinosus/ratti/thailandicus/villorum
Veillonella parvula
Vibrio cholerae

Revision editor(s): KateRasheed