Whole metagenome sequencing of cecum microbiomes in Ethiopian indigenous chickens from two different altitudes reveals antibiotic resistance genes/Experiment 1/Signature 1

EditHistoryDelete

Mark reviewed

Your review change was submitted

Needs review

Curated date: 2024/11/06

Curator: Tosin

Revision editor(s): Tosin

Source: Figure S2

Description: Taxonomic annotation of microorganisms in AF (Afar: lowland) and AM (Amhara: highland) regions through Linear Discriminant Analysis, identifying taxa with significant differences between the two regions.

Abundance in Group 1: increased abundance in Afar (AF) lowland region

NCBI	Quality Control	Links
Alistipes sp. CHKCI003
Alloprevotella
Bacteroides caecimuris
Bacteroides eggerthii
Bacteroides sp. 3_1_13
Bacteroides sp. CAG:443
Bacteroides sp. CAG:661
Bacteroides sp. CAG:714
Barnesiella sp. An22
Bifidobacterium pullorum subsp. saeculare
Coprobacter
Coprobacter secundus
Cronobacter
Cronobacter sakazakii
Desulfuromonadales
Dysgonomonadaceae
Dysgonomonas
Dysgonomonas capnocytophagoides
Flavonifractor sp. An92
Geobacter
Geobacteraceae
Parabacteroides sp. CAG:409
Phocaeicola barnesiae
Phocaeicola coprocola
Phocaeicola coprocola CAG:162
Phocaeicola plebeius
Prevotella sp. P2-180
Subdoligranulum variabile
[Eubacterium] cellulosolvens
uncultured Bacteroides sp.
uncultured Dysgonomonas sp.

Revision editor(s): Tosin