Whole metagenome sequencing of cecum microbiomes in Ethiopian indigenous chickens from two different altitudes reveals antibiotic resistance genes/Experiment 1/Signature 2

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Curated date: 2024/11/08

Curator: Tosin

Revision editor(s): Tosin

Source: Figure S2

Description: Taxonomic annotation of microorganisms in AF (Afar: lowland) and AM (Amhara: highland) regions through Linear Discriminant Analysis, identifying taxa with significant differences between the two regions.

Abundance in Group 1: decreased abundance in Afar (AF) lowland region

NCBI	Quality Control	Links
Alistipes sp. An54
Bacteroides cellulosilyticus
Bacteroides eggerthii CAG:109
Bacteroides sp. 3_1_40A
Bacteroides sp. An279
Bacteroides sp. CAG:1060
Bacteroides sp. CAG:462
Bacteroides sp. CAG:702
Bacteroidia bacterium 43-41
Blautia producta
Blautia sp. An46
Burkholderia
Burkholderiaceae
Burkholderiales
Clostridiales bacterium 59_14
Clostridiales bacterium CHKCI006
Enterocloster citroniae
Faecalibacterium
Faecalibacterium prausnitzii
Faecalibacterium sp. An121
Faecalibacterium sp. An122
Faecalibacterium sp. An192
Prevotella sp. HUN102
Faecalibacterium sp. An58
Faecalibacterium sp. An77
Holdemania
Holdemania filiformis
Lachnoclostridium sp. An138
Megasphaera
Megasphaera elsdenii
Negativicutes
Parabacteroides johnsonii
Parabacteroides sp. Marseille-P3160
Prevotella sp. CAG:1058
Prevotella sp. CAG:1124
Prevotella sp. CAG:1185
Prevotella sp. CAG:617
Prevotella sp. CAG:924
Veillonellales
Xylanibacter rarus

Revision editor(s): Tosin