The combination of sport and sport-specific diet is associated with characteristics of gut microbiota: an observational study
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Quality control
- Retracted paper
- Contamination issues suspected
- Batch effect issues suspected
- Uncontrolled confounding suspected
- Results are suspect (various reasons)
- Tags applied
Experiment 1
Subjects
- Location of subjects
- South Korea
- Host species Species from which microbiome was sampled (if applicable)
- Homo sapiens
- Body site Anatomical site where microbial samples were extracted from according to the Uber Anatomy Ontology
- Feces Cow dung,Cow pat,Droppings,Dung,Excrement,Excreta,Faeces,Fecal material,Fecal matter,Fewmet,Frass,Guano,Matières fécales@fr,Merde@fr,Ordure,Partie de la merde@fr,Piece of shit,Porción de mierda@es,Portion of dung,Portion of excrement,Portion of faeces,Portion of fecal material,Portion of fecal matter,Portion of feces,Portion of guano,Portion of scat,Portionem cacas,Scat,Spoor,Spraint,Stool,Teil der fäkalien@de,Feces
- Condition The experimental condition / phenotype studied according to the Experimental Factor Ontology
- diet Dietary,Diets,diet
- Group 0 name Corresponds to the control (unexposed) group for case-control studies
- distance runners (high carb)
- Group 1 name Corresponds to the case (exposed) group for case-control studies
- body builders (high protein)
- Group 0 sample size Number of subjects in the control (unexposed) group
- 15
- Group 1 sample size Number of subjects in the case (exposed) group
- 15
- Antibiotics exclusion Number of days without antibiotics usage (if applicable) and other antibiotics-related criteria used to exclude participants (if any)
- 6 months
Lab analysis
- Sequencing type
- 16S
- 16S variable region One or more hypervariable region(s) of the bacterial 16S gene
- V3-V4
- Sequencing platform Manufacturer and experimental platform used for quantifying microbial abundance
- Illumina
Statistical Analysis
- Statistical test
- Kruskall-Wallis
- Significance threshold p-value or FDR threshold used for differential abundance testing (if any)
- 0.05
- MHT correction Have statistical tests be corrected for multiple hypothesis testing (MHT)?
- Yes
Signature 1
Source: Table 3 and Text
Description: The combination of sport and sport-specific diet is associated with characteristics of gut microbiota: an observational study
Abundance in Group 1: increased abundance in body builders (high protein)
NCBI | Links |
---|---|
Blautia wexlerae | |
Enterobacter cloacae ⚠ |
Revision editor(s): WikiWorks
Signature 2
Source: Table 3 and Text
Description: The combination of sport and sport-specific diet is associated with characteristics of gut microbiota: an observational study
Abundance in Group 1: decreased abundance in body builders (high protein)
NCBI | Links |
---|---|
Bifidobacterium adolescentis | |
Ruminococcus callidus | |
Bacteroides caccae | |
Escherichia coli | |
Bifidobacterium | |
Escherichia | |
Lactococcus |
Revision editor(s): WikiWorks
Experiment 2
Subjects
- Location of subjects
- South Korea
- Host species Species from which microbiome was sampled (if applicable)
- Homo sapiens
- Body site Anatomical site where microbial samples were extracted from according to the Uber Anatomy Ontology
- Feces Cow dung,Cow pat,Droppings,Dung,Excrement,Excreta,Faeces,Fecal material,Fecal matter,Fewmet,Frass,Guano,Matières fécales@fr,Merde@fr,Ordure,Partie de la merde@fr,Piece of shit,Porción de mierda@es,Portion of dung,Portion of excrement,Portion of faeces,Portion of fecal material,Portion of fecal matter,Portion of feces,Portion of guano,Portion of scat,Portionem cacas,Scat,Spoor,Spraint,Stool,Teil der fäkalien@de,Feces
- Condition The experimental condition / phenotype studied according to the Experimental Factor Ontology
- diet Dietary,Diets,diet
- Group 0 name Corresponds to the control (unexposed) group for case-control studies
- control
- Group 1 name Corresponds to the case (exposed) group for case-control studies
- body builders (high protein)
- Group 0 sample size Number of subjects in the control (unexposed) group
- 15
- Group 1 sample size Number of subjects in the case (exposed) group
- 15
- Antibiotics exclusion Number of days without antibiotics usage (if applicable) and other antibiotics-related criteria used to exclude participants (if any)
- 6 months
Lab analysis
- Sequencing type
- 16S
- Sequencing platform Manufacturer and experimental platform used for quantifying microbial abundance
- Illumina
Statistical Analysis
- Statistical test
- Kruskall-Wallis
- Significance threshold p-value or FDR threshold used for differential abundance testing (if any)
- 0.05
- MHT correction Have statistical tests be corrected for multiple hypothesis testing (MHT)?
- Yes
Signature 1
Source: Table 3 and Text
Description: The combination of sport and sport-specific diet is associated with characteristics of gut microbiota: an observational study
Abundance in Group 1: increased abundance in body builders (high protein)
NCBI | Links |
---|---|
Sutterella | |
Faecalibacterium | |
Clostridium | |
Haemophilus | |
Eisenbergiella |
Revision editor(s): WikiWorks
Signature 2
Source: Table 3 and Text
Description: The combination of sport and sport-specific diet is associated with characteristics of gut microbiota: an observational study
Abundance in Group 1: decreased abundance in body builders (high protein)
Revision editor(s): WikiWorks
Experiment 3
Subjects
- Location of subjects
- South Korea
- Host species Species from which microbiome was sampled (if applicable)
- Homo sapiens
- Body site Anatomical site where microbial samples were extracted from according to the Uber Anatomy Ontology
- Feces Cow dung,Cow pat,Droppings,Dung,Excrement,Excreta,Faeces,Fecal material,Fecal matter,Fewmet,Frass,Guano,Matières fécales@fr,Merde@fr,Ordure,Partie de la merde@fr,Piece of shit,Porción de mierda@es,Portion of dung,Portion of excrement,Portion of faeces,Portion of fecal material,Portion of fecal matter,Portion of feces,Portion of guano,Portion of scat,Portionem cacas,Scat,Spoor,Spraint,Stool,Teil der fäkalien@de,Feces
- Condition The experimental condition / phenotype studied according to the Experimental Factor Ontology
- diet Dietary,Diets,diet
- Group 0 name Corresponds to the control (unexposed) group for case-control studies
- control
- Group 1 name Corresponds to the case (exposed) group for case-control studies
- distance runners (high carb)
- Group 0 sample size Number of subjects in the control (unexposed) group
- 15
- Group 1 sample size Number of subjects in the case (exposed) group
- 15
- Antibiotics exclusion Number of days without antibiotics usage (if applicable) and other antibiotics-related criteria used to exclude participants (if any)
- 6 months
Lab analysis
- Sequencing type
- 16S
- Sequencing platform Manufacturer and experimental platform used for quantifying microbial abundance
- Illumina
Statistical Analysis
- Statistical test
- Kruskall-Wallis
- Significance threshold p-value or FDR threshold used for differential abundance testing (if any)
- 0.05
- MHT correction Have statistical tests be corrected for multiple hypothesis testing (MHT)?
- Yes
Signature 1
Source: Table 3 and Text
Description: The combination of sport and sport-specific diet is associated with characteristics of gut microbiota: an observational study
Abundance in Group 1: increased abundance in distance runners (high carb)
NCBI | Links |
---|---|
Sutterella |
Revision editor(s): WikiWorks
Signature 2
Source: Table 3 and Text
Description: The combination of sport and sport-specific diet is associated with characteristics of gut microbiota: an observational study
Abundance in Group 1: decreased abundance in distance runners (high carb)
NCBI | Links |
---|---|
Enterobacter cloacae ⚠ | |
Weissella confusa | |
[Clostridium] innocuum ⚠ | |
Bacteroides caccae | |
Anaerobutyricum hallii | |
Blautia wexlerae | |
Blautia | |
Enterobacter ⚠ | |
Weissella | |
Leuconostoc ⚠ |
Revision editor(s): WikiWorks