Association of high-risk human papillomavirus infection duration and cervical lesions with vaginal microbiota composition/Experiment 8

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Reviewed Marked as Reviewed by Fatima on 2022/04/6

Curated date: 2021/03/19

Curator: Cynthia Anderson

Revision editor(s): Cynthia Anderson, WikiWorks

Subjects

Location of subjects

China

Host species Species from which microbiome was sampled. Contact us to have more species added.

Homo sapiens

Body site Anatomical site where microbial samples were extracted from according to the Uber Anatomy Ontology

Vagina Vagina,vagina,Distal oviductal region,Distal portion of oviduct,Vaginae

Condition The experimental condition / phenotype studied according to the Experimental Factor Ontology

Cervical glandular intraepithelial neoplasia Cervical glandular intraepithelial neoplasia,cervical glandular intraepithelial neoplasia

Group 0 name Corresponds to the control (unexposed) group for case-control studies

HPV-

Group 1 name Corresponds to the case (exposed) group for case-control studies

transient HPV+ with LSIL

Group 1 definition Diagnostic criteria applied to define the specific condition / phenotype represented in the case (exposed) group

high-risk HPV transient infection with low grade squamus intraepithelial lesion

Lab analysis

Sequencing type

16S

16S variable region One or more hypervariable region(s) of the bacterial 16S gene

Not specified

Sequencing platform Manufacturer and experimental platform used for quantifying microbial abundance

Illumina

Statistical Analysis

Statistical test

LEfSe

Signature 1

EditHistoryDelete

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Your review change was submitted

Reviewed Marked as Reviewed by Fatima on 2022/04/6

Curated date: 2021/03/19

Curator: Cynthia Anderson

Revision editor(s): Cynthia Anderson

Source: Figure 4D

Description: Abundance analysis of the microbiota between high-risk HPV transient infection with LSIL group and the non-infected HPV group

Abundance in Group 1: decreased abundance in transient HPV+ with LSIL

NCBI	Quality Control	Links
Devosia riboflavina
Candidatus Saccharibacteria
Sneathia
Lactobacillus
Pseudomonas
Shuttleworthella
Leptotrichiaceae
Oscillospiraceae
Pseudomonadaceae

Revision editor(s): Cynthia Anderson