Joint effects of pregnancy, sociocultural, and environmental factors on early life gut microbiome structure and diversity/Experiment 1/Signature 1

From BugSigDB
Reviewed Marked as Reviewed by Peace Sandy on 2024-2-28

Curated date: 2022/06/13

Curator: Kaluifeanyi101

Revision editor(s): Kaluifeanyi101, Peace Sandy

Source: FIGURE 5 , FIGURE 6

Description: Top genera are significantly associated with each factor retained in multi-factor neonatal gut microbiome composition models. For plotting purposes, “top” genera for each factor were defined using two characteristics: (1) the number of taxa significantly associated with it (to avoid spurious findings) and (2) how “discriminatory” the genera was, defined by consistency in the direction of taxa-specific associations. Each factor displays up to the top ten genera that best discriminated each factor, given the genera had at least 5 significant taxa. Abbreviations: ETS, environmental tobacco smoke; NSV, neonatal study visit at 1-month of age.

Top genera significantly associated with each factor retained in multi-factor models of infant gut microbiome composition. For plotting purposes, “top” genera for each factor were defined using two characteristics: (1) the number of taxa significantly associated with it (to avoid spurious findings) and (2) how “discriminatory” the genera was, defined by consistency in the direction of taxa-specific associations. Each factor displays up to the top ten genera that best discriminated each factor, given the genera had at least 5 significant taxa. Abbreviations: BMI, body mass index; ISV, infant study visit at 6-months of age.

Abundance in Group 1: increased abundance in Infants (median age = 6.6 months)

NCBI Quality ControlLinks
Akkermansia
Bifidobacterium
Blautia
Clostridium
Coprococcus
Eubacterium
Lactobacillus
Lactococcus
Prevotella
Roseburia
Ruminococcus
Staphylococcus
Parabacteroides
Faecalibacterium
Dorea
Megamonas
Paraprevotella
Peptoniphilus
Enterococcus
Candidatus Epulonipiscium
Bacteroides
Dysgonomonas
Veillonella

Revision editor(s): Kaluifeanyi101, Peace Sandy