Characterizing both bacteria and fungi improves understanding of the Arabidopsis root microbiome/Experiment 1/Signature 2
From BugSigDB
Reviewed Marked as Reviewed by Peace Sandy on 2024-2-18
Source: Table 1
Description: The top 10 differentially enriched genera from each kingdom and their preferred habitats. The estimates (coefficients) and P - values are from a generalized linear (Poisson) model, fit to determine the effect of the factor organ while taking into account differences in sequencing effort among samples. Note: the ‘Unassigned’ categories include diverse taxa, which themselves may be differentially enriched (or depleted) in the root relative to the leaf microbiome.
Abundance in Group 1: decreased abundance in Test group (Roots)
NCBI | Quality Control | Links |
---|---|---|
Janthinobacterium | ||
Pseudomonas | ||
Alternaria | ||
Articulospora | ||
Cladosporium | ||
Plectosphaerella |
Revision editor(s): Spykelionel, Peace Sandy