Genomic analysis identifies association of Fusobacterium with colorectal carcinoma/Experiment 1/Signature 1
From BugSigDB
Reviewed Marked as Reviewed by Svetlana up on 2024-6-26
Source: Figure 1C
Description: Linear discriminant analysis (LDA) coupled with effect size measurements identifies Fusobacterium as the most differentially abundant taxon in colon tumor versus normal specimens by whole-genome sequencing in nine individuals. Tumor-enriched taxa are indicated with a positive LDA score (black), and taxa enriched in normal tissue have a negative score (gray).
Abundance in Group 1: increased abundance in Colon Tumor
| NCBI | Quality Control | Links |
|---|---|---|
| Fusobacteriaceae | ||
| Fusobacterium nucleatum | ||
| Streptococcaceae | ||
| Aggregatibacter | ||
| Aggregatibacter aphrophilus |
