Uncovering Microbial Composition in Human Breast Cancer Primary Tumour Tissue Using Transcriptomic RNA-seq/Experiment 1/Signature 1
From BugSigDB
Source: Figure 3 (A)
Description: Differentially represented taxa between normal breast tissue samples (from cancer-free donors) and breast tumour tissue. (A) Comparison of the microbiome in primary tumours of Slovak patients and normal breast tissue of Slovak cancer-free donors. Since standard conditions identified too many results, to visualise data, LEfSe was run with parameters (LDA > 3, Kruskal Wallis testp-value < 0.05, Wilcoxon testp-value < 0.05)
Abundance in Group 1: increased abundance in breast cancer tumor tissue
| NCBI | Quality Control | Links |
|---|---|---|
| Rhodobacter | ||
| Micrococcus | ||
| Priestia megaterium | ||
| Priestia | ||
| Mycobacteriales | ||
| Acinetobacter | ||
| Caudoviricetes | ||
| Gorganvirus isfahan | ||
| Gorganvirus | ||
| Uroviricota | ||
| Viruses |
Revision editor(s): Ecsharp
