Uncovering Microbial Composition in Human Breast Cancer Primary Tumour Tissue Using Transcriptomic RNA-seq/Experiment 6/Signature 2
From BugSigDB
Source: Figure 4 (E)
Description: Differentially represented taxa in primary tumour tissues of Slovak patients between multiple markers statuses. For all comparisons, LEfSe was run with parameters: LDA > 3 (stricter than default LDA > 2 just for purpose of visualisation), Kruskal Wallis test p-value < 0.05, Wilcoxon test p-value < 0.05. (E) Comparison of the microbiome in primary tumours of Ki67 > 20% and Ki67 < 20%.
Abundance in Group 1: decreased abundance in Ki67 > 20% BC patients
Revision editor(s): Ecsharp
