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BugSigDB.org (published in '''[https://www.nature.com/articles/s41587-023-01872-y Nature Biotechnology''']) is a community-editable [https://www.semantic-mediawiki.org Semantic Mediawiki knowledge management system] that standardizes, enables analysis, and allows bulk download of differential abundance results from all types of metagenomic studies. You can [[Special:RequestAccount|request an account]], [[Help:Contents|learn how to contribute or analyze]], learn more [[Project:About|about]] the project, [https://github.com/waldronlab/BugSigDB/issues report issues], and ask questions on the #bugsigdb channel of the [https://slack.bioconductor.org/ community-bioc Slack team]. | BugSigDB.org (published in '''[https://www.nature.com/articles/s41587-023-01872-y Nature Biotechnology''']) is a community-editable [https://www.semantic-mediawiki.org Semantic Mediawiki knowledge management system] that standardizes, enables analysis, and allows bulk download of differential abundance results from all types of metagenomic studies. You can [[Special:RequestAccount|request an account]], [[Help:Contents|learn how to contribute or analyze]], learn more [[Project:About|about]] the project, [https://github.com/waldronlab/BugSigDB/issues report issues], and ask questions on the [https://community-bioc.slack.com/archives/C04RATV9VCY/p1697144958544289 #bugsigdb channel] of the [https://slack.bioconductor.org/ community-bioc Slack team]. | ||
[[Project:About|<span class="mw-ui-button mw-ui-progressive float-right mt-3">About this project</span>]] | [[Project:About|<span class="mw-ui-button mw-ui-progressive float-right mt-3">About this project</span>]] | ||
Revision as of 18:15, 14 October 2023
BugSigDB
A Comprehensive Database of Published Microbial Signatures
BugSigDB.org (published in Nature Biotechnology) is a community-editable Semantic Mediawiki knowledge management system that standardizes, enables analysis, and allows bulk download of differential abundance results from all types of metagenomic studies. You can request an account, learn how to contribute or analyze, learn more about the project, report issues, and ask questions on the #bugsigdb channel of the community-bioc Slack team.
375288Featured TaxonParabacteroides(genus)
- BugSigDB Statistics
- Number of studies: 208 (filter)
- Number of signatures: 329
- Number of direct descendants: 20
Study by nameFeatured Studies
Characterization and Analysis of the Skin Microbiota in Rosacea: A Case-Control Study
American journal of clinical dermatology, 2020 | Nose, Skin of cheek | Rosacea | United States of America
American journal of clinical dermatology, 2020 | Nose, Skin of cheek | Rosacea | United States of America
Structural segregation of gut microbiota between colorectal cancer patients and healthy volunteers
The ISME journal, 2012 | Feces | Colorectal cancer | China
The ISME journal, 2012 | Feces | Colorectal cancer | China
Fuzzy | Parameterized | Logical operators » Example
Statistics
- 1400 studies
- 7626 signatures
- 2195 unique taxa
- 44 host species
- 94 locations
- 173 body sites
- 518 conditions
- contributed by 178 contributors
Top 5 Contributors in the last 30 days
Last 30 days (Top 5) |
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