The Gastric Microbiome Is Perturbed in Advanced Gastric Adenocarcinoma Identified Through Shotgun Metagenomics/Experiment 1/Signature 2

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Reviewed Marked as Reviewed by Peace Sandy on 2024-2-29

Curated date: 2021/01/10

Curator: Rimsha Azhar

Revision editor(s): WikiWorks, Peace Sandy, MyleeeA

Source: Figure 2A and Figure 2B

Description: Taxonomic changes in GC microbiome. (A) Cladogram of the gastric microbial taxa associated with GC and SG. GC-enriched taxa are colored in red and SG-enriched taxa are in green. (B) Histogram of the linear discriminant analysis (LDA) scores for differentially abundant taxonomic features between GC and SG groups. Significance obtained by LDA effect size (LEfSe) at p < 0.05 (Kruksal–Wallis test) and LDAscore>2.

Abundance in Group 1: decreased abundance in Gastric adenocarcinoma (GC)

NCBI	Quality Control	Links
Actinomyces
Actinomyces graevenitzii
Alphaproteobacteria
Atopobium
Bifidobacteriaceae
Blastomonas
Coriobacteriaceae
Escherichia
Escherichia sp.
Eubacteriales
Lachnospiraceae
Lancefieldella parvula
Oribacterium sinus
Prevotella denticola
Prevotella denticola F0289
Rothia mucilaginosa
Sphingobium
Sphingobium yanoikuyae
Sphingomonadaceae
Streptococcus anginosus
Streptococcus australis
Streptococcus cristatus
Streptococcus parasanguinis
Streptococcus sanguinis
[Eubacterium] infirmum
Sphingobium xenophagum

Revision editor(s): WikiWorks, Peace Sandy, MyleeeA