Property:Statistical test
From BugSigDB
This is a property of type Text.
Statistical test or computational tool used for differential abundance testing (en)
Allowed values[edit]
- ANCOM
- ANOSIM
- ANOVA
- Beta Binomial Regression
- Chi-Square
- Cox Proportional-Hazards Regression
- Dunn's test
- DESeq2
- edgeR
- Fisher's Exact Test
- Fold-change cutoff
- Kolmogorov-Smirnov Test
- Kruskall-Wallis
- LASSO Regression
- LEfSe
- Linear Regression
- Logistic Regression
- Mann-Whitney (Wilcoxon)
- metagenomeSeq
- Metastats
- Mixed-Effects Regression
- Negative Binomial Regression
- NLMIXED
- Pearson Correlation
- PERMANOVA
- PLS-DA (Partial least square discriminant analysis)
- Random Forest Analysis
- Spearman Correlation
- Structural Equation Modeling (SEM)
- T-Test
- Wald Test
- Welch's T-Test
- Zero-Inflated Beta Regression
- Zero-Inflated Negative Binomial Regression
A
Almond Snacking for 8 wk Increases Alpha-Diversity of the Gastrointestinal Microbiome and Decreases Bacteroides fragilis Abundance Compared with an Isocaloric Snack in College Freshmen/Experiment 1 +
ANCOM +
Almond Snacking for 8 wk Increases Alpha-Diversity of the Gastrointestinal Microbiome and Decreases Bacteroides fragilis Abundance Compared with an Isocaloric Snack in College Freshmen/Experiment 2 +
ANCOM +
Almond Snacking for 8 wk Increases Alpha-Diversity of the Gastrointestinal Microbiome and Decreases Bacteroides fragilis Abundance Compared with an Isocaloric Snack in College Freshmen/Experiment 3 +
ANCOM +
T
The gut microbiome and inflammation in obsessive-compulsive disorder patients compared to age- and sex-matched controls: a pilot study/Experiment 1 +
ANCOM +
C
T
[
G
Gut microbiota in Parkinson's disease: Temporal stability and relations to disease progression/Experiment 2 +
ANCOM +
Gut microbiota in Parkinson's disease: Temporal stability and relations to disease progression/Experiment 1 +
ANCOM +
Gut microbiota in Parkinson's disease: Temporal stability and relations to disease progression/Experiment 3 +
ANCOM +
S
T
Temporal association between human upper respiratory and gut bacterial microbiomes during the course of COVID-19 in adults/Experiment 1 +
ANOSIM +
Temporal association between human upper respiratory and gut bacterial microbiomes during the course of COVID-19 in adults/Experiment 2 +
ANOSIM +
Temporal association between human upper respiratory and gut bacterial microbiomes during the course of COVID-19 in adults/Experiment 3 +
ANOSIM +
Temporal association between human upper respiratory and gut bacterial microbiomes during the course of COVID-19 in adults/Experiment 4 +
ANOSIM +
Temporal association between human upper respiratory and gut bacterial microbiomes during the course of COVID-19 in adults/Experiment 5 +
ANOSIM +
Temporal association between human upper respiratory and gut bacterial microbiomes during the course of COVID-19 in adults/Experiment 6 +
ANOSIM +
Temporal association between human upper respiratory and gut bacterial microbiomes during the course of COVID-19 in adults/Experiment 7 +
ANOSIM +
P
Showing 10 related entities (more are available).
B
- Body site-typical microbiome signatures for adults/Experiment 3 +
- Body site-typical microbiome signatures for adults/Experiment 1 +
- Body site-typical microbiome signatures for adults/Experiment 2 +
- Body site-typical microbiome signatures for adults/Experiment 4 +
- Body site-typical microbiome signatures for adults/Experiment 5 +
- Body site-typical microbiome signatures for adults/Experiment 6 +
M
- Microbiome changes in healthy volunteers treated with GSK1322322, a novel antibiotic targeting bacterial peptide deformylase/Experiment 2 +
- ...
R
- Rectal Microbiome Alterations Associated With Oral Human Immunodeficiency Virus Pre-Exposure Prophylaxis/Experiment 1 +
- Rectal Microbiome Alterations Associated With Oral Human Immunodeficiency Virus Pre-Exposure Prophylaxis/Experiment 2 +
S
{ "type": "PROPERTY_CONSTRAINT_SCHEMA", "constraints": { "type_constraint": "_txt", "allowed_values": [ "ANCOM", "ANOSIM", "ANOVA", "DESeq2", "edgeR", "Fisher's Exact Test", "Kruskall-Wallis", "LEfSe", "Linear Regression", "Logistic Regression", "Mann-Whitney (Wilcoxon)", "Metastats", "NLMIXED", "PLS-DA (Partial least square discriminant analysis)", "Random Forest Analysis", "Beta Binomial Regression", "Dunn's test", "PERMANOVA", "Negative Binomial Regression", "Chi-Square", "LASSO Regression", "Kolmogorov-Smirnov Test", "Pearson Correlation", "Spearman Correlation", "T-Test", "Wald Test", "Welch's T-Test", "Zero-Inflated Beta Regression", "Zero-Inflated Negative Binomial Regression", "Cox Proportional-Hazards Regression", "metagenomeSeq", "Structural Equation Modeling (SEM)", "Mixed-Effects Regression", "Fold-change cutoff" ] } }
