Property:Statistical test

This is a property of type Text. Statistical test or computational tool used for differential abundance testing (en)

Allowed values[edit source]

ANCOM
ANCOM-BC
ANCOM-BC2
ANOSIM
ANOVA
Beta Binomial Regression
Chi-Square
Cox Proportional-Hazards Regression
Decision Trees (xgBoost, gradient boosting)
Dunn's test
DESeq2
edgeR
Fisher's Exact Test
Fold-change cutoff
Jonckheere's trend test
Kolmogorov-Smirnov Test
Kruskall-Wallis
LASSO Regression
LEfSe
Linear Discriminant Analysis
Linear Regression
Logistic Regression
Mann-Whitney (Wilcoxon)
MaAsLin2
metagenomeSeq
Metastats
Mixed-Effects Regression
Negative Binomial Regression
NLMIXED
Pearson Correlation
PERMANOVA
PLS-DA (Partial least square discriminant analysis)
Post-Hoc Pairwise
Random Forest Analysis
Songbird
Sparse Correlations for Compositional data (SparCC)
Spearman Correlation
Structural Equation Modeling (SEM)
T-Test
treeDA
Wald Test
Welch's T-Test
Zero-Inflated Beta Regression
Zero-Inflated Negative Binomial Regression

Usage5693Improper assignments10Constraint schema

Filter<p>The <a target="_blank" rel="nofollow noreferrer noopener" class="external text" href="https://www.semantic-mediawiki.org/wiki/Help:Property_page/Filter">search filter</a> allows the inclusion of <a target="_blank" rel="nofollow noreferrer noopener" class="external text" href="https://www.semantic-mediawiki.org/wiki/Help:Query_expressions">query expressions</a> such as <code>~</code> or <code>!</code>. The selected <a target="_blank" rel="nofollow noreferrer noopener" class="external text" href="https://www.semantic-mediawiki.org/wiki/Query_engine">query engine</a> might also support case insensitive matching or other short expressions like:</p><ul><li><code>in:</code> result should include the term, e.g. '<code>in:Foo</code>'</li></ul><ul><li><code>not:</code> result should to not include the term, e.g. '<code>not:Bar</code>'</li></ul>

Showing 20 pages using this property.

0–9

10.1080/Experiment 1 +

LEfSe +

10.1080/Experiment 2 +

LEfSe +

10.1080/Experiment 3 +

MaAsLin2 +

10.1080/Experiment 4 +

MaAsLin2 +

10.1080/Experiment 5 +

MaAsLin2 +

10.1080/Experiment 6 +

MaAsLin2 +

10.1080/Experiment 7 +

MaAsLin2 +

10.1080/Experiment 8 +

MaAsLin2 +

10.1080/Experiment 9 +

MaAsLin2 +

10.1080/Experiment 10 +

MaAsLin2 +

10.1080/Experiment 11 +

MaAsLin2 +

10.1080/Experiment 12 +

MaAsLin2 +

10.3389/Experiment 1 +

ANOVA +

10.3390/Experiment 1 +

LEfSe +

16S gut community of the Cameron County Hispanic Cohort/Experiment 1 +

Mann-Whitney (Wilcoxon) +

16S rRNA amplicon sequencing identifies microbiota associated with oral cancer, human papilloma virus infection and surgical treatment/Experiment 1 +

LEfSe +

16S rRNA amplicon sequencing identifies microbiota associated with oral cancer, human papilloma virus infection and surgical treatment/Experiment 2 +

LEfSe +

16S rRNA amplicon sequencing identifies microbiota associated with oral cancer, human papilloma virus infection and surgical treatment/Experiment 3 +

LEfSe +

16S rRNA and metagenomic shotgun sequencing data revealed consistent patterns of gut microbiome signature in pediatric ulcerative colitis/Experiment 1 +

Mann-Whitney (Wilcoxon) +

16S rRNA gene amplicon sequencing of gut microbiota in gestational diabetes mellitus and their correlation with disease risk factors/Experiment 1 +

LEfSe +

Showing 10 related entities (more are available).

B

F

M

Microbiome changes in healthy volunteers treated with GSK1322322, a novel antibiotic targeting bacterial peptide deformylase/Experiment 2 +

{"type": "PROPERTY_CONSTRAINT_SCHEMA",
-
"constraints": {"type_constraint": "_txt",
-
"allowed_values": ["ANCOM",
"ANCOM-BC",
"ANCOM-BC2",
"ANOSIM",
"ANOVA",
"Beta Binomial Regression",
"Chi-Square",
"Cox Proportional-Hazards Regression",
"Decision Trees (xgBoost, gradient boosting)",
"Dunn's test",
"DESeq2",
"edgeR",
"Fisher's Exact Test",
"Fold-change cutoff",
"Jonckheere's trend test",
"Kolmogorov-Smirnov Test",
"Kruskall-Wallis",
"LASSO Regression",
"LEfSe",
"Linear Discriminant Analysis",
"Linear Regression",
"Logistic Regression",
"Mann-Whitney (Wilcoxon)",
"MaAsLin2",
"metagenomeSeq",
"Metastats",
"Mixed-Effects Regression",
"Negative Binomial Regression",
"NLMIXED",
"Pearson Correlation",
"PERMANOVA",
"PLS-DA (Partial least square discriminant analysis)",
"Post-Hoc Pairwise",
"Random Forest Analysis",
"Songbird",
"Sparse Correlations for Compositional data (SparCC)",
"Spearman Correlation",
"Structural Equation Modeling (SEM)",
"T-Test",
"treeDA",
"Wald Test",
"Welch's T-Test",
"Zero-Inflated Beta Regression",
"Zero-Inflated Negative Binomial Regression"
]
}
}